• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

来自……的甲醇脱氢酶的发现与生化特性分析

Discovery and Biochemical Characterization of a Methanol Dehydrogenase From .

作者信息

Lee Jin-Young, Park Sung-Hyun, Oh So-Hyung, Lee Jin-Ju, Kwon Kil Koang, Kim Su-Jin, Choi Minjeong, Rha Eugene, Lee Hyewon, Lee Dae-Hee, Sung Bong Hyun, Yeom Soo-Jin, Lee Seung-Goo

机构信息

Synthetic Biology and Bioengineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, South Korea.

Department of Biosystems and Bioengineering, KRIBB School of Biotechnology, University of Science and Technology, Daejeon, South Korea.

出版信息

Front Bioeng Biotechnol. 2020 Feb 14;8:67. doi: 10.3389/fbioe.2020.00067. eCollection 2020.

DOI:10.3389/fbioe.2020.00067
PMID:32117944
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7033420/
Abstract

Bioconversion of C1 chemicals such as methane and methanol into higher carbon-chain chemicals has been widely studied. Methanol oxidation catalyzed by methanol dehydrogenase (Mdh) is one of the key steps in methanol utilization in bacterial methylotrophy. In bacteria, few NAD-dependent Mdhs have been reported that convert methanol to formaldehyde. In this study, an uncharacterized Mdh gene from (Lxmdh) was cloned and expressed in . The maximum alcohol oxidation activity of the recombinant enzyme was observed at pH 9.5 and 55°C in the presence of 10 mM Mg. To improve oxidation activity, rational approach-based, site-directed mutagenesis of 16 residues in the putative active site and NAD-binding region was performed. The mutations S101V, T141S, and A164F improved the enzyme's specific activity toward methanol compared to that of the wild-type enzyme. These mutants show a slightly higher turnover rate than that of wild-type, although their values were increased compared to that of wild-type. Consequently, according the kinetic results, S101, T141, and A164 positions may related to the catalytic activity in the active site for methanol dehydrogenation. It should be further studied other mutant variants with high activity for methanol. In conclusion, we characterized a new Lxmdh and its variants that may be potentially useful for the development of synthetic methylotrophy in the future.

摘要

将甲烷和甲醇等C1化学物质生物转化为更高碳链的化学物质已得到广泛研究。甲醇脱氢酶(Mdh)催化的甲醇氧化是细菌甲基营养中甲醇利用的关键步骤之一。在细菌中,很少有将甲醇转化为甲醛的依赖NAD的Mdh被报道。在本研究中,从[具体来源未提及]克隆了一个未表征的Mdh基因(Lxmdh)并在[具体宿主未提及]中表达。在10 mM Mg存在的情况下,重组酶在pH 9.5和55°C时观察到最大醇氧化活性。为了提高氧化活性,对假定活性位点和NAD结合区域中的16个残基进行了基于理性方法的定点诱变。与野生型酶相比,突变体S101V、T141S和A164F提高了酶对甲醇的比活性。这些突变体的周转速率比野生型略高,尽管它们的Km值与野生型相比有所增加。因此,根据动力学结果,S101、T141和A164位点可能与甲醇脱氢活性位点的催化活性有关。对于甲醇具有高活性的其他突变变体应进一步研究。总之,我们表征了一种新的Lxmdh及其变体,它们可能在未来合成甲基营养的发展中具有潜在用途。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dc4/7033420/36c795f0f107/fbioe-08-00067-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dc4/7033420/1cbd3472c007/fbioe-08-00067-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dc4/7033420/d214d5041911/fbioe-08-00067-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dc4/7033420/0aa1874f8316/fbioe-08-00067-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dc4/7033420/c5577f999d92/fbioe-08-00067-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dc4/7033420/0a9fbe908757/fbioe-08-00067-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dc4/7033420/36c795f0f107/fbioe-08-00067-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dc4/7033420/1cbd3472c007/fbioe-08-00067-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dc4/7033420/d214d5041911/fbioe-08-00067-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dc4/7033420/0aa1874f8316/fbioe-08-00067-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dc4/7033420/c5577f999d92/fbioe-08-00067-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dc4/7033420/0a9fbe908757/fbioe-08-00067-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dc4/7033420/36c795f0f107/fbioe-08-00067-g006.jpg

相似文献

1
Discovery and Biochemical Characterization of a Methanol Dehydrogenase From .来自……的甲醇脱氢酶的发现与生化特性分析
Front Bioeng Biotechnol. 2020 Feb 14;8:67. doi: 10.3389/fbioe.2020.00067. eCollection 2020.
2
Biosensor-Based Directed Evolution of Methanol Dehydrogenase from .基于生物传感器的[具体来源]甲醇脱氢酶的定向进化 。 (原文中“from”后面缺少具体内容)
Int J Mol Sci. 2021 Feb 2;22(3):1471. doi: 10.3390/ijms22031471.
3
[Methanol dehydrogenase, a key enzyme of one-carbon metabolism: a review].[甲醇脱氢酶,一碳代谢的关键酶:综述]
Sheng Wu Gong Cheng Xue Bao. 2021 Feb 25;37(2):530-540. doi: 10.13345/j.cjb.200335.
4
Characterization and evolution of an activator-independent methanol dehydrogenase from Cupriavidus necator N-1.从铜绿假单胞菌 N-1 中分离出一种无需激活剂的甲醇脱氢酶的特性及进化研究。
Appl Microbiol Biotechnol. 2016 Jun;100(11):4969-83. doi: 10.1007/s00253-016-7320-3. Epub 2016 Feb 5.
5
Methanol Dehydrogenases as a Key Biocatalysts for Synthetic Methylotrophy.甲醇脱氢酶作为合成甲基营养的关键生物催化剂。
Front Bioeng Biotechnol. 2021 Dec 24;9:787791. doi: 10.3389/fbioe.2021.787791. eCollection 2021.
6
Development of Bacillus methanolicus methanol dehydrogenase with improved formaldehyde reduction activity.提高甲醛还原活性的巴氏甲烷八叠球菌甲醇脱氢酶的开发。
Sci Rep. 2018 Aug 20;8(1):12483. doi: 10.1038/s41598-018-31001-8.
7
Directed evolution of a neutrophilic and mesophilic methanol dehydrogenase based on high-throughput and accurate measurement of formaldehyde.基于高通量且精确的甲醛测量对嗜中性和嗜温性甲醇脱氢酶进行定向进化。
Synth Syst Biotechnol. 2023 Jun 8;8(3):386-395. doi: 10.1016/j.synbio.2023.05.004. eCollection 2023 Sep.
8
Phage-Assisted Evolution of Bacillus methanolicus Methanol Dehydrogenase 2.噬菌体辅助的甲醇芽孢杆菌甲醇脱氢酶2的进化
ACS Synth Biol. 2019 Apr 19;8(4):796-806. doi: 10.1021/acssynbio.8b00481. Epub 2019 Mar 20.
9
Methylotrophic Bacillus methanolicus encodes two chromosomal and one plasmid born NAD+ dependent methanol dehydrogenase paralogs with different catalytic and biochemical properties.甲醇营养型芽孢杆菌编码两种依赖 NAD+的甲醇脱氢酶同工酶,分别位于染色体和质粒上,具有不同的催化和生化特性。
PLoS One. 2013;8(3):e59188. doi: 10.1371/journal.pone.0059188. Epub 2013 Mar 19.
10
Lanthanide-Dependent Regulation of Methylotrophy in Strain 22A.22A菌株中镧系元素依赖性甲基营养调控
mSphere. 2018 Jan 24;3(1). doi: 10.1128/mSphere.00462-17. eCollection 2018 Jan-Feb.

引用本文的文献

1
Industrial applicability of enzymatic and whole-cell processes for the utilization of C1 building blocks.利用C1构建模块的酶促和全细胞过程的工业适用性。
Nat Commun. 2025 Aug 1;16(1):7066. doi: 10.1038/s41467-025-60777-3.
2
Silver Nanoparticles (AgNPs) from sp. Culture Broths: Antibacterial Activity, Mechanism Insights, and Synergy with Classical Antibiotics.来自特定菌种培养液的银纳米颗粒(AgNPs):抗菌活性、作用机制洞察以及与传统抗生素的协同作用
Biomolecules. 2025 May 16;15(5):731. doi: 10.3390/biom15050731.
3
Cobalt modulates methanol turnover of the alcohol dehydrogenase in strain TPOSR.

本文引用的文献

1
Synthetic methanol auxotrophy of Escherichia coli for methanol-dependent growth and production.大肠杆菌甲醇营养缺陷型用于甲醇依赖型生长和生产。
Metab Eng. 2018 Sep;49:257-266. doi: 10.1016/j.ymben.2018.08.010. Epub 2018 Aug 30.
2
Engineering the biological conversion of methanol to specialty chemicals in Escherichia coli.在大肠杆菌中工程化生物转化甲醇为特种化学品。
Metab Eng. 2017 Jan;39:49-59. doi: 10.1016/j.ymben.2016.10.015. Epub 2016 Nov 1.
3
Characterization and evolution of an activator-independent methanol dehydrogenase from Cupriavidus necator N-1.
钴调节TPOSR菌株中乙醇脱氢酶的甲醇周转率。
Appl Environ Microbiol. 2025 May 21;91(5):e0021525. doi: 10.1128/aem.00215-25. Epub 2025 Apr 9.
4
Sustainable Bioconversion of Methanol: A Renewable Employing Novel Alcohol Oxidase and Pyruvate Aldolase.甲醇的可持续生物转化:利用新型醇氧化酶和丙酮酸醛缩酶的可再生方法
J Agric Food Chem. 2025 Apr 16;73(15):9165-9173. doi: 10.1021/acs.jafc.4c12671. Epub 2025 Apr 2.
5
Directed evolution of a neutrophilic and mesophilic methanol dehydrogenase based on high-throughput and accurate measurement of formaldehyde.基于高通量且精确的甲醛测量对嗜中性和嗜温性甲醇脱氢酶进行定向进化。
Synth Syst Biotechnol. 2023 Jun 8;8(3):386-395. doi: 10.1016/j.synbio.2023.05.004. eCollection 2023 Sep.
6
One-Pot Biosynthesis of 2-Keto-4-hydroxybutyrate from Cheap C1 Compounds Using Rationally Designed Pyruvate Aldolase and Methanol Dehydrogenase.一锅法利用理性设计的丙酮酸醛缩酶和甲醇脱氢酶从廉价 C1 化合物合成 2-酮基-4-羟基丁酸。
J Agric Food Chem. 2023 Mar 15;71(10):4328-4336. doi: 10.1021/acs.jafc.2c09108. Epub 2023 Mar 1.
7
Insights into the genome of Methylobacterium sp. NMS14P, a novel bacterium for growth promotion of maize, chili, and sugarcane.解析: - 关键词:Insights 意为“见解、深刻的理解”,genome 意为“基因组”,bacterium 意为“细菌”,Maize 意为“玉米”,Chili 意为“辣椒”,Sugarcane 意为“甘蔗”,Growth promotion 意为“促进生长”。 - 译文:解析新型促生长玉米、辣椒和甘蔗细菌——甲基杆菌 NMS14P 的基因组。 **译文**:解析新型促生长玉米、辣椒和甘蔗细菌——甲基杆菌 NMS14P 的基因组。
PLoS One. 2023 Feb 7;18(2):e0281505. doi: 10.1371/journal.pone.0281505. eCollection 2023.
8
: A Biological Factories Intended for Bio-Insecticidal, Bio-Control, and Bioremediation Activities.一种用于生物杀虫、生物防治和生物修复活动的生物工厂。
J Fungi (Basel). 2022 Dec 8;8(12):1288. doi: 10.3390/jof8121288.
9
Toward Methanol-Based Biomanufacturing: Emerging Strategies for Engineering Synthetic Methylotrophy in .迈向甲醇生物制造:在 中工程合成甲醇营养型的新兴策略。
ACS Synth Biol. 2022 Aug 19;11(8):2548-2563. doi: 10.1021/acssynbio.2c00110. Epub 2022 Jul 17.
10
In Vitro One-Pot 3-Hydroxypropanal Production from Cheap C1 and C2 Compounds.利用廉价的C1和C2化合物体外一锅法生产3-羟基丙醛
Int J Mol Sci. 2022 Apr 3;23(7):3990. doi: 10.3390/ijms23073990.
从铜绿假单胞菌 N-1 中分离出一种无需激活剂的甲醇脱氢酶的特性及进化研究。
Appl Microbiol Biotechnol. 2016 Jun;100(11):4969-83. doi: 10.1007/s00253-016-7320-3. Epub 2016 Feb 5.
4
Mutations in adenine-binding pockets enhance catalytic properties of NAD(P)H-dependent enzymes.腺嘌呤结合口袋中的突变增强了NAD(P)H依赖性酶的催化特性。
Protein Eng Des Sel. 2016 Jan;29(1):31-8. doi: 10.1093/protein/gzv057. Epub 2015 Oct 27.
5
Engineering Escherichia coli for methanol conversion.工程大肠杆菌进行甲醇转化。
Metab Eng. 2015 Mar;28:190-201. doi: 10.1016/j.ymben.2014.12.008. Epub 2015 Jan 14.
6
In vitro activation of NAD-dependent alcohol dehydrogenases by Nudix hydrolases is more widespread than assumed.Nudix水解酶对NAD依赖型乙醇脱氢酶的体外激活作用比预期更为普遍。
FEBS Lett. 2014 Aug 25;588(17):2993-9. doi: 10.1016/j.febslet.2014.06.008. Epub 2014 Jun 10.
7
Methylotrophic Bacillus methanolicus encodes two chromosomal and one plasmid born NAD+ dependent methanol dehydrogenase paralogs with different catalytic and biochemical properties.甲醇营养型芽孢杆菌编码两种依赖 NAD+的甲醇脱氢酶同工酶,分别位于染色体和质粒上,具有不同的催化和生化特性。
PLoS One. 2013;8(3):e59188. doi: 10.1371/journal.pone.0059188. Epub 2013 Mar 19.
8
Structures of iron-dependent alcohol dehydrogenase 2 from Zymomonas mobilis ZM4 with and without NAD+ cofactor.铁依赖型乙醇脱氢酶 2 来自运动发酵单胞菌 ZM4 与和没有 NAD+辅因子的结构。
J Mol Biol. 2011 Apr 1;407(3):413-24. doi: 10.1016/j.jmb.2011.01.045. Epub 2011 Feb 3.
9
AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading.AutoDock Vina:通过新的评分函数、高效优化和多线程改进对接的速度和准确性。
J Comput Chem. 2010 Jan 30;31(2):455-61. doi: 10.1002/jcc.21334.
10
1,3-Propanediol dehydrogenase from Klebsiella pneumoniae: decameric quaternary structure and possible subunit cooperativity.肺炎克雷伯菌的1,3-丙二醇脱氢酶:十聚体四级结构及可能的亚基协同性
J Bacteriol. 2009 Feb;191(4):1143-51. doi: 10.1128/JB.01077-08. Epub 2008 Nov 14.