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使用卷积特征和支持向量机对肾小球细胞增生进行分类。

Classification of glomerular hypercellularity using convolutional features and support vector machine.

机构信息

IVISION Lab, Universidade Federal da Bahia, Bahia, Brazil.

PPGM, Universidade Federal da Bahia, Bahia, Brazil.

出版信息

Artif Intell Med. 2020 Mar;103:101808. doi: 10.1016/j.artmed.2020.101808. Epub 2020 Jan 25.

DOI:10.1016/j.artmed.2020.101808
PMID:32143802
Abstract

Glomeruli are histological structures of the kidney cortex formed by interwoven blood capillaries, and are responsible for blood filtration. Glomerular lesions impair kidney filtration capability, leading to protein loss and metabolic waste retention. An example of lesion is the glomerular hypercellularity, which is characterized by an increase in the number of cell nuclei in different areas of the glomeruli. Glomerular hypercellularity is a frequent lesion present in different kidney diseases. Automatic detection of glomerular hypercellularity would accelerate the screening of scanned histological slides for the lesion, enhancing clinical diagnosis. Having this in mind, we propose a new approach for classification of hypercellularity in human kidney images. Our proposed method introduces a novel architecture of a convolutional neural network (CNN) along with a support vector machine, achieving near perfect average results on FIOCRUZ data set in a binary classification (lesion or normal). Additionally, classification of hypercellularity sub-lesions was also evaluated, considering mesangial, endocapilar and both lesions, reaching an average accuracy of 82%. Either in binary task or in the multi-classification one, our proposed method outperformed Xception, ResNet50 and InceptionV3 networks, as well as a traditional handcrafted-based method. To the best of our knowledge, this is the first study on deep learning over a data set of glomerular hypercellularity images of human kidney.

摘要

肾小球是肾脏皮质的组织学结构,由交织的毛细血管组成,负责血液过滤。肾小球病变会损害肾脏的过滤能力,导致蛋白质丢失和代谢废物潴留。病变的一个例子是肾小球细胞增多症,其特征是肾小球不同区域的细胞核数量增加。肾小球细胞增多症是不同肾脏疾病中常见的病变。自动检测肾小球细胞增多症可以加速对病变扫描组织学幻灯片的筛选,从而增强临床诊断。考虑到这一点,我们提出了一种用于人类肾脏图像中细胞增多症分类的新方法。我们提出的方法引入了一种卷积神经网络 (CNN) 的新架构,以及支持向量机,在 FIOCRUZ 数据集的二进制分类(病变或正常)中实现了近乎完美的平均结果。此外,还评估了细胞增多症亚病变的分类,考虑到系膜、内皮和两种病变,平均准确率达到 82%。无论是在二进制任务还是多分类任务中,我们提出的方法都优于 Xception、ResNet50 和 InceptionV3 网络,以及传统的基于手工制作的方法。据我们所知,这是第一项关于深度学习在人类肾脏肾小球细胞增多症图像数据集上的研究。

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