Yang Xiaodong, Xu Shaoqing, Qian Yiwei, He Xiaoqin, Chen Shengdi, Xiao Qin
Department of Neurology, Ruijin Hospital Affiliated with the School of Medicine, Shanghai Jiao Tong University, Shanghai, China.
Front Neurosci. 2020 Feb 26;14:97. doi: 10.3389/fnins.2020.00097. eCollection 2020.
Decreased expression of peroxisome proliferator-activated receptor gamma coactivator-1α (PGC-1α) is implicated in the pathophysiology of Parkinson's disease (PD). However, our understanding of the mechanism regulating the PGC-1α expression is still limited. We sought to determine whether the epigenetic modification of (the gene encoding PGC-1α) could account for its diminished expression. We performed a study of risk-SNP genotypes, methylation level, and the expression in blood from 171 subjects. The mean DNA methylation level of intron 1 in patients with PD was higher than that in the controls (7.18 ± 1.74 vs. 6.36 ± 1.28, = 0.007). A detailed comparison of the DNA methylation level at each CpG site showed that CpG_1, CpG_13.14, CpG_17.18, and CpG_20 were significantly hypermethylated in patients with PD. There was a significant negative correlation between methylation and expression level ( = -0.404, < 0.001). We found no correlations between the methylation level and the clinical features, while the CpG_13.14 site methylation level was positively correlated with H&Y stage ( = 0.246, = 0.020) and was increased in people carrying the rs2970848 AA genotype compared with that in carriers of the AG/GG genotype (7.27 ± 1.86 vs. 6.65 ± 1.92, = 0.032). Our results support a link between methylation, gene expression, and variability, which indicated that a novel epigenetic regulatory mechanism controlling expression influences PD pathogenesis.
过氧化物酶体增殖物激活受体γ辅激活因子1α(PGC-1α)表达降低与帕金森病(PD)的病理生理学有关。然而,我们对调节PGC-1α表达的机制的理解仍然有限。我们试图确定(编码PGC-1α的基因)的表观遗传修饰是否可以解释其表达降低的原因。我们对171名受试者的风险单核苷酸多态性(SNP)基因型、甲基化水平和血液中的表达进行了研究。PD患者中第1内含子的平均DNA甲基化水平高于对照组(7.18±1.74对6.36±1.28,P = 0.007)。对每个CpG位点的DNA甲基化水平进行详细比较显示,PD患者中CpG_1、CpG_13.14、CpG_17.18和CpG_20显著高甲基化。(该基因)甲基化与表达水平之间存在显著负相关(r = -0.404,P < 0.001)。我们发现(该基因)甲基化水平与临床特征之间无相关性,而CpG_13.14位点甲基化水平与H&Y分期呈正相关(r = 0.246,P = 0.020),并且与携带rs2970848 AA基因型的人相比,AG/GG基因型携带者中该位点甲基化水平升高(7.27±1.86对6.65±1.92,P = 0.032)。我们的结果支持(该基因)甲基化、基因表达和变异性之间的联系,这表明一种控制(该基因)表达的新型表观遗传调控机制影响PD的发病机制。