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一种新型17β-雌二醇降解菌DH-B01的鉴定及基因组分析

Identification and genome analysis of a novel 17β-estradiol degradation bacterium, DH-B01.

作者信息

Wang Yaojia, Zhao Xueying, Tian Kejian, Meng Fanxing, Zhou Dongwen, Xu Xin, Zhang Hongyan, Huo Hongliang

机构信息

1School of Environment, Northeast Normal University, No. 2555 Jingyue Avenue, Changchun, Jilin China.

3School of Life Sciences, Northeast Normal University, No. 5268, Renmin Main Street, Nanguan District, Changchun, Jilin China.

出版信息

3 Biotech. 2020 Apr;10(4):166. doi: 10.1007/s13205-020-2155-0. Epub 2020 Mar 11.

Abstract

The natural estrogen 17β-estradiol (17β-E2) is a major endocrine disruptor. Accordingly, due to their frequent presence in global surface waters, prolonged exposure to estrogen-contaminated water may disrupt sexual development in animals. It has adverse effects on wildlife and humans. To date, the most effective strategy for estrogen removal from the environment is biodegradation using microorganisms. To this end, we isolated a strain of , namely DH-B01, from a contraceptive factory in Beijing. The experimental results revealed that the bacterium has a high capacity to degrade estrogen, with a 17β-E2 degradation rate of about 97%, and produces the secondary metabolite estrone. In addition, a series of genes involved in steroid metabolism and stress response in sp. DH-B01 were predicted, and several key genes with high similarity to those of other strains were subjected to sequence alignment to find their conserved regions. This is the first study of the ability of strains to degrade estrogens and the degradation mechanism involved. This work advances the genomic study of estrogen-degrading strains and the study of bacterial estrogen degradation mechanisms. In this paper, a novel bacterial strain capable of degrading 17β-E2 was studied. sp. DH-B01 can effectively degrade 17β-E2. During the degradation process, 17β-E2 can be gradually metabolized to a substance without estrogen activity. By analyzing the enzymatic reactions in the metabolic process, we found genes with high similarity to reported 17β-HSD. sp. DH-B01 was found to degrade 17β-E2. There are many types of bacteria that are currently being studied for the degradation of estrogen, but sp. DH-B01 is the only strain of that has been shown to degrade estrogen. This work advances the genomic study of estrogen-degrading bacterial strains and the study of bacterial estrogen degradation mechanisms. Additionally, it explores the correlation between different strains. The differences play an important role and further enrich the functionality and diversity of strains. In subsequent studies, the specificity of sp. DH-B01 can be applied to different environments for future environmental restoration.

摘要

天然雌激素17β-雌二醇(17β-E2)是一种主要的内分泌干扰物。因此,由于其频繁出现在全球地表水中,长期接触受雌激素污染的水可能会扰乱动物的性发育。它对野生动物和人类都有不良影响。迄今为止,从环境中去除雌激素的最有效策略是利用微生物进行生物降解。为此,我们从北京的一家避孕药厂分离出了一株细菌,即DH-B01。实验结果表明,该细菌具有很高的雌激素降解能力,17β-E2的降解率约为97%,并产生次级代谢产物雌酮。此外,预测了DH-B01菌株中一系列参与类固醇代谢和应激反应的基因,并对几个与其他菌株具有高度相似性的关键基因进行了序列比对,以找到它们的保守区域。这是首次对该菌株降解雌激素的能力及其涉及的降解机制进行研究。这项工作推进了雌激素降解菌株的基因组研究以及细菌雌激素降解机制的研究。本文研究了一种能够降解17β-E2的新型细菌菌株。DH-B01菌株能够有效降解17β-E2。在降解过程中,17β-E2可逐渐代谢为一种无雌激素活性的物质。通过分析代谢过程中的酶促反应,我们发现了与已报道的17β-羟基类固醇脱氢酶(17β-HSD)具有高度相似性的基因。发现DH-B01菌株可降解17β-E2。目前正在研究多种用于降解雌激素的细菌,但DH-B01菌株是唯一已被证明能够降解雌激素的该属菌株。这项工作推进了雌激素降解细菌菌株的基因组研究以及细菌雌激素降解机制的研究。此外,它还探索了不同该属菌株之间的相关性。这些差异起着重要作用,并进一步丰富了该属菌株的功能和多样性。在后续研究中,DH-B01菌株的特异性可应用于不同环境,用于未来的环境修复。

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