Instituto Gulbenkian de Ciência, Rua da Quinta Grande 6, Oeiras, Portugal.
Fondazione The Microsoft Research - University of Trento Centre for Computational and Systems Biology (COSBI), Rovereto (TN), Italy.
Cancer Res. 2020 Jun 1;80(11):2407-2420. doi: 10.1158/0008-5472.CAN-19-3147. Epub 2020 Mar 26.
Epithelial-to-mesenchymal transition (EMT) has been associated with cancer cell heterogeneity, plasticity, and metastasis. However, the extrinsic signals supervising these phenotypic transitions remain elusive. To assess how selected microenvironmental signals control cancer-associated phenotypes along the EMT continuum, we defined a logical model of the EMT cellular network that yields qualitative degrees of cell adhesions by adherens junctions and focal adhesions, two features affected during EMT. The model attractors recovered epithelial, mesenchymal, and hybrid phenotypes. Simulations showed that hybrid phenotypes may arise through independent molecular paths involving stringent extrinsic signals. Of particular interest, model predictions and their experimental validations indicated that: (i) stiffening of the extracellular matrix was a prerequisite for cells overactivating FAK_SRC to upregulate SNAIL and acquire a mesenchymal phenotype and (ii) FAK_SRC inhibition of cell-cell contacts through the receptor-type tyrosine-protein phosphatases kappa led to acquisition of a full mesenchymal, rather than a hybrid, phenotype. Altogether, these computational and experimental approaches allow assessment of critical microenvironmental signals controlling hybrid EMT phenotypes and indicate that EMT involves multiple molecular programs. SIGNIFICANCE: A multidisciplinary study sheds light on microenvironmental signals controlling cancer cell plasticity along EMT and suggests that hybrid and mesenchymal phenotypes arise through independent molecular paths.
上皮-间充质转化 (EMT) 与癌细胞异质性、可塑性和转移有关。然而,监督这些表型转变的外在信号仍然难以捉摸。为了评估选定的微环境信号如何沿着 EMT 连续体控制与癌症相关的表型,我们定义了 EMT 细胞网络的逻辑模型,该模型通过黏附连接和焦点连接产生定性的细胞黏附程度,这两个特征在 EMT 过程中受到影响。该模型吸引子恢复了上皮、间充质和混合表型。模拟表明,混合表型可能通过涉及严格外在信号的独立分子途径产生。特别有趣的是,模型预测及其实验验证表明:(i) 细胞外基质的变硬是细胞过度激活 FAK_SRC 以上调 SNAIL 并获得间充质表型的前提条件;(ii) 通过受体型酪氨酸蛋白磷酸酶 kappa 抑制细胞-细胞接触导致获得完全的间充质表型,而不是混合表型。总之,这些计算和实验方法允许评估控制混合 EMT 表型的关键微环境信号,并表明 EMT 涉及多个分子程序。意义:一项多学科研究揭示了控制 EMT 过程中癌细胞可塑性的微环境信号,并表明混合表型和间充质表型是通过独立的分子途径产生的。