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分支嵴在转移性调控网络中的作用。

Cusp bifurcation in a metastatic regulatory network.

机构信息

Applied Mathematics and Statistics Department, Stony Brook University, Stony Brook, NY 11794, USA.

The Louis and Beatrice Laufer Center for Physical and Quantitative Biology, Stony Brook University, Stony Brook, NY 11794, USA; Department of Biomedical Engineering Department, Stony Brook University, Stony Brook, NY 11794, USA.

出版信息

J Theor Biol. 2023 Nov 7;575:111630. doi: 10.1016/j.jtbi.2023.111630. Epub 2023 Oct 5.

Abstract

Understanding the potential for cancers to metastasize is still relatively unknown. While many predictive methods may use deep learning or stochastic processes, we highlight a long standing mathematical concept that may be useful for modeling metastatic breast cancer systems. Ordinary differential equations (ODEs) can model cell state transitions by considering the pertinent environmental variables as well as the paths systems take over time. Bifurcation theory is a branch of dynamical systems which studies changes in the behavior of an ODE system while one or more parameters are varied. Many studies have applied concepts in one-parameter bifurcation theory to model biological network dynamics, and cell division. However, studies of two-parameter bifurcations are much more rare. Two-parameter bifurcations have not been studied in metastatic systems. Here we show how a specific two-parameter bifurcation phenomenon called a cusp bifurcation separates two qualitatively different metastatic cell state transitions modalities and propose a new perspective on defining such transitions based on mathematical theory. We hope the observations and verification methods detailed here may help in the understanding of metastatic potential from a basic biological perspective and in clinical settings.

摘要

尽管许多预测方法可能使用深度学习或随机过程,但我们强调了一个长期存在的数学概念,该概念可能对建模转移性乳腺癌系统有用。常微分方程 (ODE) 可以通过考虑相关环境变量以及系统随时间的路径来模拟细胞状态的转变。分支理论是动力系统的一个分支,研究了当一个或多个参数变化时 ODE 系统的行为变化。许多研究已经将单参数分支理论的概念应用于生物网络动力学和细胞分裂的建模中。然而,对双参数分支的研究要少得多。双参数分支尚未在转移性系统中进行研究。在这里,我们展示了一种称为尖点分支的特定双参数分支现象如何将两种定性不同的转移性细胞状态转变模式分开,并基于数学理论提出了一种定义此类转变的新视角。我们希望这里详细描述的观察和验证方法可以帮助从基本生物学角度和临床环境中理解转移潜能。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8254/11132523/78445c28ae9f/nihms-1995597-f0002.jpg

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