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腰果中 PR10 蛋白的鉴定及生物信息学分析。

Identification and in silico bioinformatics analysis of PR10 proteins in cashew nut.

机构信息

Wageningen Food and Biobased Research, Wageningen University and Research, Wageningen, The Netherlands.

Institute of Life Technologies, HES-SO Valais-Wallis, Sion, Switzerland.

出版信息

Protein Sci. 2020 Jul;29(7):1581-1595. doi: 10.1002/pro.3856. Epub 2020 May 16.

Abstract

Proteins from cashew nut can elicit mild to severe allergic reactions. Three allergenic proteins have already been identified, and it is expected that additional allergens are present in cashew nut. pathogenesis-related protein 10 (PR10) allergens from pollen have been found to elicit similar allergic reactions as those from nuts and seeds. Therefore, we investigated the presence of PR10 genes in cashew nut. Using RNA-seq analysis, we were able to identify several PR10-like transcripts in cashew nut and clone six putative PR10 genes. In addition, PR10 protein expression in raw cashew nuts was confirmed by immunoblotting and liquid chromatography-mass spectrometry (LC-MS/MS) analyses. An in silico allergenicity assessment suggested that all identified cashew PR10 proteins are potentially allergenic and may represent three different isoallergens.

摘要

腰果中的蛋白质可能引发轻度至重度过敏反应。已经鉴定出三种过敏原蛋白,预计腰果中还存在其他过敏原。花粉中的病程相关蛋白 10(PR10)过敏原已被发现与坚果和种子引发类似的过敏反应。因此,我们研究了腰果中是否存在 PR10 基因。通过 RNA-seq 分析,我们能够在腰果中鉴定出几种类似 PR10 的转录本,并克隆了六个推定的 PR10 基因。此外,通过免疫印迹和液相色谱-质谱(LC-MS/MS)分析证实了生腰果中 PR10 蛋白的表达。计算机预测的变应原性评估表明,所有鉴定出的腰果 PR10 蛋白都可能具有变应原性,可能代表三种不同的同种异体蛋白。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9aa9/7314402/5b1cc6ed21b5/PRO-29-1581-g001.jpg

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