Bokma Jade, Van Driessche Laura, Deprez Piet, Haesebrouck Freddy, Vahl Marianne, Weesendorp Eefke, Deurenberg Ruud H, Pardon Bart, Boyen Filip
Department of Large Animal Internal Medicine, Faculty of Veterinary Medicine, Ghent University, Merelbeke, Belgium
Department of Large Animal Internal Medicine, Faculty of Veterinary Medicine, Ghent University, Merelbeke, Belgium.
J Clin Microbiol. 2020 May 26;58(6). doi: 10.1128/JCM.00004-20.
is a leading cause of pneumonia in modern calf rearing. Fast identification is essential to ensure appropriate antimicrobial therapy. Therefore, the objective of this study was to develop a protocol to identify from bronchoalveolar lavage fluid (BALf) with matrix-assisted laser desorption ionization-time of flight mass spectrometry MALDI-TOF MS and to determine the diagnostic accuracy in comparison with other techniques. BALf was obtained from 104 cattle, and the presence of was determined in the following three ways: (i) rapid identification of with MALDI-TOF MS (RIMM) (BALf was enriched and after 24, 48, and 72 h of incubation and was analyzed using MALDI-TOF MS), (ii) triplex real-time PCR for , , and , and (iii) 10-day incubation on selective-indicative agar. The diagnostic accuracy of the three tests was determined with Bayesian latent class modeling (BLCM). After 24 h of enrichment, was identified with MALDI-TOF MS in 3 out of 104 BALf samples. After 48 and 72 h of enrichment, 32/104 and 38/100 samples, respectively, were positive. Lipase-positive -like colonies were seen in 28 of 104 samples. Real-time PCR resulted in 28/104 positive and 12/104 doubtful results for The BLCM showed a sensitivity (Se) and specificity (Sp) of 86.6% (95% credible interval [CI], 69.4% to 97.6%) and 86.4% (CI, 76.1 to 93.8) for RIMM. For real-time PCR, Se was 94.8% (CI, 89.9 to 97.9) and Sp was 88.9% (CI, 78.0 to 97.4). For selective-indicative agar, Se and Sp were 70.5% (CI, 52.1 to 87.1) and 93.9% (CI, 85.9 to 98.4), respectively. These results suggest that rapid identification of with MALDI-TOF MS after an enrichment procedure is a promising test for routine diagnostics in veterinary laboratories.
是现代犊牛饲养中肺炎的主要病因。快速鉴定对于确保适当的抗菌治疗至关重要。因此,本研究的目的是制定一种方案,通过基质辅助激光解吸电离飞行时间质谱(MALDI-TOF MS)从支气管肺泡灌洗液(BALf)中鉴定,并与其他技术比较确定诊断准确性。从104头牛获取BALf,并通过以下三种方法确定的存在:(i)用MALDI-TOF MS快速鉴定(RIMM)(BALf经富集,在孵育24、48和72小时后,用MALDI-TOF MS分析),(ii)针对、和的三重实时PCR,以及(iii)在选择性指示琼脂上孵育10天。用贝叶斯潜在类别模型(BLCM)确定三种检测方法的诊断准确性。富集24小时后,在104份BALf样本中的3份中用MALDI-TOF MS鉴定出。富集48和72小时后,分别有32/104和38/100份样本为阳性。在104份样本中的28份中观察到脂酶阳性的样菌落。实时PCR对的检测结果为28/104阳性和12/104可疑结果。BLCM显示RIMM的敏感性(Se)和特异性(Sp)分别为86.6%(95%可信区间[CI],69.4%至97.6%)和86.4%(CI,76.1至93.8)。对于实时PCR,Se为94.8%(CI,89.9至97.9),Sp为88.9%(CI,78.0至97.4)。对于选择性指示琼脂,Se和Sp分别为70.5%(CI,52.1至87.1)和93.9%(CI,85.9至98.4)。这些结果表明,富集程序后用MALDI-TOF MS快速鉴定是兽医实验室常规诊断中有前景的检测方法。