Suppr超能文献

细菌天然产物生物合成的隐藏酶学

The hidden enzymology of bacterial natural product biosynthesis.

作者信息

Scott Thomas A, Piel Jörn

机构信息

Institute of Microbiology, ETH Zürich, Zürich, Switzerland.

出版信息

Nat Rev Chem. 2019 Jul;3(7):404-425. doi: 10.1038/s41570-019-0107-1. Epub 2019 Jun 12.

Abstract

Bacterial natural products display astounding structural diversity, which, in turn, endows them with a remarkable range of biological activities that are of significant value to modern society. Such structural features are generated by biosynthetic enzymes that construct core scaffolds or perform peripheral modifications, and can thus define natural product families, introduce pharmacophores and permit metabolic diversification. Modern genomics approaches have greatly enhanced our ability to access and characterize natural product pathways via sequence-similarity-based bioinformatics discovery strategies. However, many biosynthetic enzymes catalyse exceptional, unprecedented transformations that continue to defy functional prediction and remain hidden from us in bacterial (meta)genomic sequence data. In this Review, we highlight exciting examples of unusual enzymology that have been uncovered recently in the context of natural product biosynthesis. These suggest that much of the natural product diversity, including entire substance classes, awaits discovery. New approaches to lift the veil on the cryptic chemistries of the natural product universe are also discussed.

摘要

细菌天然产物展现出惊人的结构多样性,这进而赋予它们一系列显著的生物活性,对现代社会具有重要价值。这些结构特征由构建核心骨架或进行外围修饰的生物合成酶产生,因此可以定义天然产物家族、引入药效基团并实现代谢多样化。现代基因组学方法极大地增强了我们通过基于序列相似性的生物信息学发现策略来获取和表征天然产物途径的能力。然而,许多生物合成酶催化特殊的、前所未有的转化,这些转化仍然难以进行功能预测,并且在细菌(宏)基因组序列数据中对我们来说仍然是隐藏的。在本综述中,我们重点介绍了最近在天然产物生物合成背景下发现的不寻常酶学的激动人心的例子。这些表明,许多天然产物的多样性,包括整个物质类别,仍有待发现。我们还讨论了揭开天然产物世界隐秘化学面纱的新方法。

相似文献

1
The hidden enzymology of bacterial natural product biosynthesis.细菌天然产物生物合成的隐藏酶学
Nat Rev Chem. 2019 Jul;3(7):404-425. doi: 10.1038/s41570-019-0107-1. Epub 2019 Jun 12.
3
Modifications of Prenyl Side Chains in Natural Product Biosynthesis.天然产物生物合成中异戊二烯侧链的修饰。
Angew Chem Int Ed Engl. 2024 Dec 20;63(52):e202415279. doi: 10.1002/anie.202415279. Epub 2024 Nov 11.
4
New chemistry from natural product biosynthesis.天然产物生物合成中的新化学。
Biochem Soc Trans. 2016 Jun 15;44(3):738-44. doi: 10.1042/BST20160063.
6
Leveraging Microbial Genomes and Genomic Context for Chemical Discovery.利用微生物基因组和基因组背景进行化学发现。
Acc Chem Res. 2021 Jul 6;54(13):2788-2797. doi: 10.1021/acs.accounts.1c00100. Epub 2021 Jun 4.
7
Plant metabolic clusters - from genetics to genomics.植物代谢簇——从遗传学到基因组学
New Phytol. 2016 Aug;211(3):771-89. doi: 10.1111/nph.13981. Epub 2016 Apr 26.

引用本文的文献

8
Late-stage diversification of bacterial natural products through biocatalysis.通过生物催化实现细菌天然产物的后期多样化
Front Bioeng Biotechnol. 2024 May 14;12:1351583. doi: 10.3389/fbioe.2024.1351583. eCollection 2024.

本文引用的文献

4
Radical Approach to Enzymatic β-Thioether Bond Formation.激进的酶促β-硫醚键形成方法。
J Am Chem Soc. 2019 Jan 16;141(2):990-997. doi: 10.1021/jacs.8b11060. Epub 2018 Dec 28.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验