Department of Epidemiology and Biostatistics, School of Public Health, Fudan University, Key Laboratory of Public Health Safety of Ministry of Education, School of Public Health, Fudan University, Shanghai, China.
Department of Infectious Diseases, The First Affiliated Hospital of Nanjing Medical University, Nanjing, Jiangsu, China.
PLoS Negl Trop Dis. 2020 Apr 6;14(4):e0008178. doi: 10.1371/journal.pntd.0008178. eCollection 2020 Apr.
Elimination of the intermediate snail host of Schistosoma is the most effective way to control schistosomiasis and the most important first step is to accurately identify the snail habitats. Due to the substantial resources required for traditional, manual snail-searching in the field, and potential risk of miss-classification of potential snail habitats by remote sensing, more convenient and precise methods are urgently needed. Snail data (N = 15,000) from two types of snail habitats (lake/marshland and hilly areas) in Anhui Province, a typical endemic area for schistosomiasis, were collected together with 36 environmental variables covering the whole province. Twelve different models were built and evaluated with indices, such as area under the curve (AUC), Kappa, percent correctly classified (PCC), sensitivity and specificity. We found the presence-absence models performing better than those based on presence-only. However, those derived from machine-learning, especially the random forest (RF) approach were preferable with all indices above 0.90. Distance to nearest river was found to be the most important variable for the lake/marshlands, while the climatic variables were more important for the hilly endemic areas. The predicted high-risk areas for potential snail habitats of the lake/marshland type exist mainly along the Yangtze River, while those of the hilly type are dispersed in the areas south of the Yangtze River. We provide here the first comprehensive risk profile of potential snail habitats based on precise examinations revealing the true distribution and habitat type, thereby improving efficiency and accuracy of snail control including better allocation of limited health resources.
消除血吸虫中间宿主是控制血吸虫病最有效的方法,而最重要的第一步是准确识别螺类栖息地。由于传统的野外人工螺类搜索需要大量资源,并且遥感可能存在潜在螺类栖息地分类错误的风险,因此迫切需要更方便和精确的方法。从安徽省两种类型的螺类栖息地(湖泊/沼泽地和丘陵地区)共收集了 15000 个螺类数据,以及涵盖全省的 36 个环境变量。使用包括曲线下面积 (AUC)、Kappa、正确分类百分比 (PCC)、敏感性和特异性在内的指标,建立并评估了 12 种不同的模型。我们发现存在-缺失模型的表现优于仅基于存在的模型。然而,基于机器学习的模型,尤其是随机森林 (RF) 方法,在所有指标上都优于 0.90。对于湖泊/沼泽地,距离最近河流最近的距离是最重要的变量,而对于丘陵流行地区,气候变量更为重要。预测的湖泊/沼泽地类型潜在螺类栖息地的高风险区域主要沿长江存在,而丘陵类型的高风险区域则分布在长江以南地区。我们在此首次提供了基于精确检查的潜在螺类栖息地的全面风险概况,揭示了真实的分布和栖息地类型,从而提高了螺类控制的效率和准确性,包括更好地分配有限的卫生资源。