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德国猪鼻腔微生物群,特别关注与家畜相关的耐甲氧西林菌——一种培养组学方法

The Porcine Nasal Microbiota with Particular Attention to Livestock-Associated Methicillin-Resistant in Germany-A Culturomic Approach.

作者信息

Schlattmann Andreas, von Lützau Knut, Kaspar Ursula, Becker Karsten

机构信息

Institute of Medical Microbiology, University Hospital Münster, 48149 Münster, Germany.

Landeszentrum Gesundheit Nordrhein-Westfalen, Fachgruppe Infektiologie und Hygiene, 44801 Bochum, Germany.

出版信息

Microorganisms. 2020 Apr 4;8(4):514. doi: 10.3390/microorganisms8040514.

Abstract

Livestock-associated methicillin-resistant (LA-MRSA) remains a serious public health threat. Porcine nasal cavities are predominant habitats of LA-MRSA. Hence, components of their microbiota might be of interest as putative antagonistically acting competitors. Here, an extensive culturomics approach has been applied including 27 healthy pigs from seven different farms; five were treated with antibiotics prior to sampling. Overall, 314 different species with standing in nomenclature and 51 isolates representing novel bacterial taxa were detected. was isolated from pigs on all seven farms sampled, comprising ten different types with t899 ( = 15, 29.4%) and t337 ( = 10, 19.6%) being most frequently isolated. Twenty-six MRSA (mostly t899) were detected on five out of the seven farms. Positive correlations between MRSA colonization and age and colonization with , and a negative correlation between colonization with MRSA and spp. were found ( < 0.05). Of 209 non- members of the family, 25 isolates (12.0%) from three out of the seven farms exhibited methicillin resistance, including two isolates carrying the gene. Among 125 , none tested positive for extended-spectrum beta-lactamase (ESBL) and carbapenemase production. The high frequency of methicillin-resistant staphylococci supports the need for enhanced efforts within the "One Health" concept to manage the antibiotic resistance crisis in the human and veterinary medicine sector.

摘要

家畜相关的耐甲氧西林金黄色葡萄球菌(LA-MRSA)仍然是严重的公共卫生威胁。猪鼻腔是LA-MRSA的主要栖息地。因此,其微生物群的组成部分可能作为假定的拮抗竞争菌而受到关注。在此,采用了广泛的培养组学方法,包括来自七个不同农场的27头健康猪;其中五头在采样前接受了抗生素治疗。总体而言,检测到314种具有命名地位的不同物种以及51株代表新细菌类群的分离株。在所有七个采样农场的猪中均分离到了[具体细菌名称未给出],包括十种不同类型,其中t899(n = 15,29.4%)和t337(n = 10,19.6%)最为常见。在七个农场中的五个农场检测到26株MRSA(大多为t899)。发现MRSA定植与年龄以及与[具体细菌名称未给出]的定植呈正相关,而与MRSA定植和[具体细菌名称未给出]属呈负相关(P < 0.05)。在[具体细菌科未给出]科的209株非[具体细菌名称未给出]成员中,来自七个农场中的三个农场的25株分离株(12.0%)表现出耐甲氧西林特性,包括两株携带[具体基因未给出]基因的[具体细菌名称未给出]分离株。在125株[具体细菌名称未给出]中,没有一株检测出超广谱β-内酰胺酶(ESBL)和碳青霉烯酶产生呈阳性。耐甲氧西林葡萄球菌的高频率表明需要在“同一健康”概念下加大力度,以应对人类和兽医学领域的抗生素耐药危机。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1275/7232296/a131148481d1/microorganisms-08-00514-g001.jpg

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