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转录延伸因子GreA在细菌生存力、抗生素敏感性及细胞内存活能力中的作用

Involvement of Transcription Elongation Factor GreA in Viability, Antibiotic Susceptibility, and Intracellular Fitness.

作者信息

Feng Siyuan, Liu Yan, Liang Wanfei, El-Sayed Ahmed Mohamed Abd El-Gawad, Zhao Zihan, Shen Cong, Roberts Adam P, Liang Lujie, Liao Liya, Zhong Zhijuan, Guo Zhaowang, Yang Yongqiang, Wen Xin, Chen Hongtao, Tian Guo-Bao

机构信息

Department of Microbiology, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, China.

Key Laboratory of Tropical Diseases Control, Ministry of Education, Sun Yat-sen University, Guangzhou, China.

出版信息

Front Microbiol. 2020 Mar 23;11:413. doi: 10.3389/fmicb.2020.00413. eCollection 2020.

DOI:10.3389/fmicb.2020.00413
PMID:32265867
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7104715/
Abstract

There is growing evidence that GreA aids adaptation to stressful environments in various bacteria. However, the functions of GreA among mycobacteria remain obscure. Here, we report on cellular consequences following deletion of gene in spp. The mutant strain (Δ) was generated in , (MTB) H37Ra, and H37Rv. Deletion of results in growth retardation and poor survival in response to adverse stress, besides rendering more susceptible to vancomycin and rifampicin. By using RNA-seq, we observe that disrupting results in the differential regulation of 195 genes in with 167 being negatively regulated. Among these, KEGG pathways significantly enriched for differentially regulated genes included tryptophan metabolism, starch and sucrose metabolism, and carotenoid biosynthesis, supporting a role of GreA in the metabolic regulation of mycobacteria. Moreover, like GreA, GreA exhibits a series of conservative features, and the anti-backtracking activity of C-terminal domain is indispensable for the expression of , a gene was down-regulated in the RNA-seq data. Interestingly, the decrease in the expression of by CRISPR interference, resulted in reduced growth. Finally, intracellular fitness significantly declines due to loss of . Our data indicates that GreA is an important factor for the survival and resistance establishment in spp. This study provides new insight into GreA as a potential target in multi-drug resistant TB treatment.

摘要

越来越多的证据表明,GreA有助于多种细菌适应应激环境。然而,GreA在分枝杆菌中的功能仍不清楚。在此,我们报告了在结核分枝杆菌中缺失该基因后的细胞后果。在耻垢分枝杆菌、结核分枝杆菌(MTB)H37Ra和H37Rv中构建了该突变菌株(Δ)。缺失该基因除了使结核分枝杆菌对万古霉素和利福平更敏感外,还导致生长迟缓以及在应激条件下存活率降低。通过RNA测序,我们观察到破坏该基因导致结核分枝杆菌中有195个基因的表达发生差异调节,其中167个基因被负调控。在这些基因中,差异调节基因显著富集的KEGG通路包括色氨酸代谢、淀粉和蔗糖代谢以及类胡萝卜素生物合成,这支持了GreA在分枝杆菌代谢调节中的作用。此外,与其他GreA一样,结核分枝杆菌GreA也表现出一系列保守特征,并且C末端结构域的抗回溯活性对于一个在RNA测序数据中表达下调的基因的表达是不可或缺的。有趣的是,通过CRISPR干扰降低该基因的表达会导致生长减缓。最后,由于该基因缺失,细胞内适应性显著下降。我们的数据表明,GreA是结核分枝杆菌生存和建立抗性的重要因素。本研究为将GreA作为耐多药结核病治疗的潜在靶点提供了新的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4a1/7104715/b7664f941cdf/fmicb-11-00413-g007.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4a1/7104715/58782769570c/fmicb-11-00413-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4a1/7104715/b7664f941cdf/fmicb-11-00413-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4a1/7104715/e86593b8b40a/fmicb-11-00413-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4a1/7104715/019ff6ad5a03/fmicb-11-00413-g002.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4a1/7104715/58782769570c/fmicb-11-00413-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4a1/7104715/b7664f941cdf/fmicb-11-00413-g007.jpg

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