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抗干旱且促进植物生长的根际细菌鞘氨醇单胞菌属菌株Cra20的全基因组序列

Complete genome sequence of Sphingomonas sp. Cra20, a drought resistant and plant growth promoting rhizobacteria.

作者信息

Luo Yang, Zhou Meng, Zhao Qi, Wang Fang, Gao Jiangli, Sheng Hongmei, An Lizhe

机构信息

Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China.

State Key Laboratory of Grassland Agro-ecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou 730020, China.

出版信息

Genomics. 2020 Sep;112(5):3648-3657. doi: 10.1016/j.ygeno.2020.04.013. Epub 2020 Apr 22.

Abstract

Sphingomonas sp. Cra20 is a rhizobacteria isolated from the root surface of Leontopodium leontopodioides in the Tianshan Mountains of China and was found to influence root system architecture. We analyzed its ability for plant-growth promotion and the molecular mechanism involved by combining the physiological and genome information. The results indicated that the bacterium enhanced the drought resistance of Arabidopsis thaliana and promoted growth mainly through the strain-released volatile organic compounds. The genome consisted of one circular chromosome and one circular plasmid, containing a series of genes related to the plant-growth promotion. Furthermore, multiple copies of cold-associated genes, general stress response genes, oxidative stress genes and DNA repair mechanisms supported its survivability in extreme environments. In addition, the strain had the ability to degrade xylene and 2, 4-D via a variety of monooxygenases and dioxygenases. This provides further information and will promote the application of Cra20 as a biofertilizer in agriculture.

摘要

鞘氨醇单胞菌属菌株Cra20是从中国天山山脉火绒草的根际分离出的一种根际细菌,已发现其会影响根系结构。我们结合生理和基因组信息分析了其促进植物生长的能力及相关分子机制。结果表明,该细菌增强了拟南芥的抗旱性,主要通过菌株释放的挥发性有机化合物促进生长。其基因组由一条环状染色体和一个环状质粒组成,包含一系列与促进植物生长相关的基因。此外,多个拷贝的冷相关基因、一般应激反应基因、氧化应激基因和DNA修复机制支持其在极端环境中的生存能力。此外,该菌株具有通过多种单加氧酶和双加氧酶降解二甲苯和2,4-二氯苯氧乙酸的能力。这提供了更多信息,并将促进Cra20作为生物肥料在农业中的应用。

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