Key Laboratory of Sustainable Forest Ecosystem Management-Ministry of Education, Northeast Forestry University, Harbin 150040, PR China.
Key Laboratory of Sustainable Forest Ecosystem Management-Ministry of Education, Northeast Forestry University, Harbin 150040, PR China.
Gene. 2020 Jul 30;749:144712. doi: 10.1016/j.gene.2020.144712. Epub 2020 Apr 28.
The quantitative real-time polymerase chain reaction (qRT-PCR) has rapidly become the most sensitive and accurate method for the quantitative analysis of gene expression. Normalization of gene expression to that of relatively stably expressed housekeeping genes is required to facilitate the study of gene expression and to obtain more accurate RT-PCR data. However, no studies of the stability of expression of housekeeping genes in Lymantria dispar have been reported. In the present study, BestKeeper, GeNorm and NormFinder statistical software was used to evaluate the expression of thirteen candidate reference genes in L. dispar under different conditions. The expression levels of candidate reference genes were determined for two biological factors (developmental stages and tissues) and four abiotic treatments (temperature, insecticide, CO and starvation). The results showed that the best candidate reference genes in L. dispar were TUB, AK, RPS15 for developmental stages, RPL32 and GAPDH for tissues, ACTB and EF1-α for CO stress, GAPDH and RPL32 for temperature stress, RPS3 and GAPDH for insecticide stress, and GAPDH and RPS3 for starvation stress. In summary, EF1-α and TUB are preferential housekeeping genes in L. dispar under various conditions. These results provide a basis for the further study of functional genes of L. dispar.
实时荧光定量聚合酶链反应(qRT-PCR)已迅速成为定量分析基因表达最敏感和准确的方法。为了便于研究基因表达并获得更准确的 RT-PCR 数据,需要将基因表达标准化为相对稳定表达的管家基因。然而,目前尚未有关于舞毒蛾管家基因表达稳定性的研究。在本研究中,使用 BestKeeper、GeNorm 和 NormFinder 统计软件评估了 13 种候选参考基因在不同条件下在舞毒蛾中的表达情况。候选参考基因的表达水平分别针对两个生物学因素(发育阶段和组织)和四个非生物处理(温度、杀虫剂、CO 和饥饿)进行了测定。结果表明,舞毒蛾中最佳的候选参考基因是 TUB、AK、RPS15 用于发育阶段,RPL32 和 GAPDH 用于组织,ACTB 和 EF1-α 用于 CO 胁迫,GAPDH 和 RPL32 用于温度胁迫,RPS3 和 GAPDH 用于杀虫剂胁迫,GAPDH 和 RPS3 用于饥饿胁迫。综上所述,EF1-α 和 TUB 是舞毒蛾在各种条件下优先选择的管家基因。这些结果为进一步研究舞毒蛾的功能基因提供了依据。