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多血统全基因组荟萃分析中的基因-教育程度相互作用确定了新的血压基因座。

Gene-educational attainment interactions in a multi-ancestry genome-wide meta-analysis identify novel blood pressure loci.

机构信息

Cardiovascular Division, Department of Medicine, Washington University, St. Louis, MO, 63110, USA.

Division of Biostatistics, Washington University School of Medicine, St. Louis, MO, 63110, USA.

出版信息

Mol Psychiatry. 2021 Jun;26(6):2111-2125. doi: 10.1038/s41380-020-0719-3. Epub 2020 May 5.

DOI:10.1038/s41380-020-0719-3
PMID:32372009
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7641978/
Abstract

Educational attainment is widely used as a surrogate for socioeconomic status (SES). Low SES is a risk factor for hypertension and high blood pressure (BP). To identify novel BP loci, we performed multi-ancestry meta-analyses accounting for gene-educational attainment interactions using two variables, "Some College" (yes/no) and "Graduated College" (yes/no). Interactions were evaluated using both a 1 degree of freedom (DF) interaction term and a 2DF joint test of genetic and interaction effects. Analyses were performed for systolic BP, diastolic BP, mean arterial pressure, and pulse pressure. We pursued genome-wide interrogation in Stage 1 studies (N = 117 438) and follow-up on promising variants in Stage 2 studies (N = 293 787) in five ancestry groups. Through combined meta-analyses of Stages 1 and 2, we identified 84 known and 18 novel BP loci at genome-wide significance level (P < 5 × 10). Two novel loci were identified based on the 1DF test of interaction with educational attainment, while the remaining 16 loci were identified through the 2DF joint test of genetic and interaction effects. Ten novel loci were identified in individuals of African ancestry. Several novel loci show strong biological plausibility since they involve physiologic systems implicated in BP regulation. They include genes involved in the central nervous system-adrenal signaling axis (ZDHHC17, CADPS, PIK3C2G), vascular structure and function (GNB3, CDON), and renal function (HAS2 and HAS2-AS1, SLIT3). Collectively, these findings suggest a role of educational attainment or SES in further dissection of the genetic architecture of BP.

摘要

受教育程度被广泛用作社会经济地位(SES)的替代指标。低 SES 是高血压和高血压(BP)的危险因素。为了确定新的 BP 基因座,我们使用两个变量“大专”(是/否)和“本科毕业”(是/否)进行了多民族荟萃分析,以解释基因-教育程度的相互作用。使用 1 个自由度(DF)交互项和 2DF 联合遗传和交互作用效应检验评估了相互作用。对收缩压、舒张压、平均动脉压和脉压进行了分析。我们在 5 个血统组中进行了第一阶段研究(N=117438)的全基因组检测,在第二阶段研究(N=293787)中对有前途的变体进行了后续研究。通过第一阶段和第二阶段的联合荟萃分析,我们在全基因组显著水平(P<5×10)鉴定了 84 个已知和 18 个新的 BP 基因座。两个新的基因座是基于与教育程度的 1DF 交互测试确定的,而其余 16 个基因座是通过遗传和交互效应的 2DF 联合测试确定的。在非洲裔个体中发现了 10 个新的基因座。由于涉及到与 BP 调节相关的生理系统,因此一些新的基因座具有很强的生物学合理性。它们包括参与中枢神经系统-肾上腺信号轴的基因(ZDHHC17、CADPS、PIK3C2G)、血管结构和功能(GNB3、CDON)以及肾功能(HAS2 和 HAS2-AS1、SLIT3)。总的来说,这些发现表明教育程度或 SES 在进一步解析 BP 的遗传结构方面起着作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a042/7641978/0fe3c66f8bb8/nihms-1579455-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a042/7641978/86f57fbcab14/nihms-1579455-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a042/7641978/0fe3c66f8bb8/nihms-1579455-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a042/7641978/86f57fbcab14/nihms-1579455-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a042/7641978/0fe3c66f8bb8/nihms-1579455-f0002.jpg

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