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了解嗜热嗜碱脂肪酶的热稳定性和有机溶剂稳定性:来自计算预测和实验的见解

Understanding thermal and organic solvent stability of thermoalkalophilic lipases: insights from computational predictions and experiments.

作者信息

Shehata Mohamed, Timucin Emel, Venturini Alessandro, Sezerman Osman Uğur

机构信息

Institute of Health Science, Department of Medical Biotechnology, Acibadem Mehmet Ali Aydınlar University, Atasehir, Istanbul, Turkey.

Department of Biostatistics and Medical Informatics, School of Medicine, Acibadem Mehmet Ali Aydınlar University, Atasehir, Istanbul, Turkey.

出版信息

J Mol Model. 2020 May 8;26(6):122. doi: 10.1007/s00894-020-04396-3.

Abstract

Bacillus thermocatenulatus lipase (BTL2), a member of the isolated lipase family known as thermoalkalophilic lipases, carries potential for industrial applications owing to its ability to catalyze versatile reactions under extreme conditions. This study investigates the molecular effects of distinct solvents on the stability of BTL2 at different temperatures, aiming to contribute to lipase use in industrial applications. Initially, molecular dynamic (MD) simulations were carried out to address for the molecular impacts of distinct solvents on the structural stability of BTL2 at different temperatures. Two lipase conformations representing the active and inactive forms were simulated in 5 solvents including water, ethanol, methanol, cyclohexane, and toluene. Low temperature simulations showed that polar solvents led to enhanced lid fluctuations compared with non-polar solvents reflecting a more dynamic equilibrium between active and inactive lipase conformations in polar solvents including water, while the overall structure of the lipase in both forms became more rigid in non-polar solvents than they were in polar solvent. Notably, the native lipase fold was maintained in non-polar solvents even at high temperatures, indicating an enhancement of lipase's thermostability in non-polar organic solvents. Next, we conducted experiments for which BTL2 was expressed in a heterologous host and purified to homogeneity, and its thermostability in different solvents was assessed. Parallel to the computational findings, experimental results suggested that non-polar organic solvents contributed to BTL2's thermostability at concentrations as high as 70% (v/v). Altogether, this study provides beneficial insights to the lipase use under extreme conditions. Graphical Abstract.

摘要

嗜热链状芽孢杆菌脂肪酶(BTL2)是被称为嗜热嗜碱脂肪酶的分离脂肪酶家族的一员,因其能够在极端条件下催化多种反应而具有工业应用潜力。本研究调查了不同溶剂在不同温度下对BTL2稳定性的分子影响,旨在为脂肪酶在工业应用中的使用提供帮助。最初,进行了分子动力学(MD)模拟,以研究不同溶剂在不同温度下对BTL2结构稳定性的分子影响。在包括水、乙醇、甲醇、环己烷和甲苯在内的5种溶剂中模拟了代表活性和非活性形式的两种脂肪酶构象。低温模拟表明,与非极性溶剂相比,极性溶剂导致盖子波动增强,这反映了在包括水在内的极性溶剂中活性和非活性脂肪酶构象之间更动态的平衡,而两种形式的脂肪酶在非极性溶剂中的整体结构比在极性溶剂中更刚性。值得注意的是,即使在高温下,天然脂肪酶折叠在非极性溶剂中也得以维持,这表明脂肪酶在非极性有机溶剂中的热稳定性增强。接下来,我们进行了实验,在异源宿主中表达BTL2并纯化至同质,评估其在不同溶剂中的热稳定性。与计算结果平行,实验结果表明,非极性有机溶剂在浓度高达70%(v/v)时有助于BTL2的热稳定性。总之,本研究为极端条件下脂肪酶的使用提供了有益的见解。图形摘要。

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