Dipartimento di Scienze della Salute, Università "Magna Græcia" di Catanzaro, Campus Universitario "S. Venuta", Viale Europa, Loc. Germaneto, 88100 Catanzaro, Italy.
Net4Science srl, Università "Magna Græcia" di Catanzaro, Campus Universitario "S. Venuta", Viale Europa, Loc. Germaneto, 88100 Catanzaro, Italy.
Molecules. 2020 May 6;25(9):2174. doi: 10.3390/molecules25092174.
Essential oils (EOs) are popular in aromatherapy, a branch of alternative medicine that claims their curative effects. Moreover, several studies reported EOs as potential anti-cancer agents by inducing apoptosis in different cancer cell models. In this study, we have considered EOs as a potential resource of new kinase inhibitors with a polypharmacological profile. On the other hand, computational methods offer the possibility to predict the theoretical activity profile of ligands, discovering dangerous off-targets and/or synergistic effects due to the potential multi-target action. With this aim, we performed a Structure-Based Virtual Screening (SBVS) against X-ray models of several protein kinases selected from the Protein Data Bank (PDB) by using a chemoinformatics database of EOs. By evaluating theoretical binding affinity, 13 molecules were detected among EOs as new potential kinase inhibitors with a multi-target profile. The two compounds with higher percentages in the EOs were studied more in depth by means Induced Fit Docking (IFD) protocol, in order to better predict their binding modes taking into account also structural changes in the receptor. Finally, given its good binding affinity towards five different kinases, cinnamyl cinnamate was biologically tested on different cell lines with the aim to verify the antiproliferative activity. Thus, this work represents a starting point for the optimization of the most promising EOs structure as kinase inhibitors with multi-target features.
精油(EOs)在芳香疗法中很受欢迎,芳香疗法是一种替代医学的分支,声称它们具有治疗效果。此外,一些研究报告称,精油通过诱导不同癌症细胞模型中的细胞凋亡,具有潜在的抗癌作用。在这项研究中,我们将 EOs 视为具有多药理学特征的新型激酶抑制剂的潜在资源。另一方面,计算方法提供了预测配体理论活性谱的可能性,通过潜在的多靶作用发现危险的脱靶和/或协同效应。为此,我们通过使用源自蛋白质数据银行(PDB)的几种蛋白激酶的 X 射线模型,对精油的化学信息数据库进行了基于结构的虚拟筛选(SBVS)。通过评估理论结合亲和力,在精油中检测到 13 种作为新的潜在多靶激酶抑制剂的分子。精油中含量较高的两种化合物通过诱导契合对接(IFD)方案进行了更深入的研究,以便更好地预测它们的结合模式,同时考虑到受体的结构变化。最后,鉴于肉桂酰肉桂酸对五种不同激酶具有良好的结合亲和力,它被生物测试用于不同的细胞系,以验证其抗增殖活性。因此,这项工作为优化最有前途的 EOs 结构作为具有多靶特征的激酶抑制剂提供了一个起点。