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北极危机中的微生物基因组学。

Microbial genomics amidst the Arctic crisis.

机构信息

Interdisciplinary Centre for Environmental Microbiology, Institute of Biological, Environmental and Rural Sciences, Cledwyn Building, Aberystwyth University, Cymru SY23 3DD, UK.

出版信息

Microb Genom. 2020 May;6(5). doi: 10.1099/mgen.0.000375. Epub 2020 May 11.

Abstract

The Arctic is warming - fast. Microbes in the Arctic play pivotal roles in feedbacks that magnify the impacts of Arctic change. Understanding the genome evolution, diversity and dynamics of Arctic microbes can provide insights relevant for both fundamental microbiology and interdisciplinary Arctic science. Within this synthesis, we highlight four key areas where genomic insights to the microbial dimensions of Arctic change are urgently required: the changing Arctic Ocean, greenhouse gas release from the thawing permafrost, 'biological darkening' of glacial surfaces, and human activities within the Arctic. Furthermore, we identify four principal challenges that provide opportunities for timely innovation in Arctic microbial genomics. These range from insufficient genomic data to develop unifying concepts or model organisms for Arctic microbiology to challenges in gaining authentic insights to the structure and function of low-biomass microbiota and integration of data on the causes and consequences of microbial feedbacks across scales. We contend that our insights to date on the genomics of Arctic microbes are limited in these key areas, and we identify priorities and new ways of working to help ensure microbial genomics is in the vanguard of the scientific response to the Arctic crisis.

摘要

北极正在迅速变暖。北极的微生物在放大北极变化影响的反馈中起着关键作用。了解北极微生物的基因组演化、多样性和动态,可以为基础微生物学和跨学科北极科学提供相关的见解。在这篇综述中,我们强调了四个关键领域,迫切需要对北极变化的微生物层面进行基因组研究:变化中的北极海洋、永久冻土解冻释放的温室气体、冰川表面的“生物变暗”以及北极地区的人类活动。此外,我们确定了四个主要挑战,为北极微生物基因组学的及时创新提供了机会。这些挑战包括缺乏足够的基因组数据来为北极微生物学开发统一的概念或模式生物,以及难以获得对低生物量微生物群落结构和功能的真实见解,以及整合跨尺度微生物反馈的原因和后果的数据。我们认为,我们目前对北极微生物基因组学的了解在这些关键领域是有限的,并确定了优先事项和新的工作方式,以确保微生物基因组学处于应对北极危机的科学前沿。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a33d/7371112/9de24a10f6be/mgen-6-375-g001.jpg

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