• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

黏合蛋白和凝聚蛋白以细胞周期依赖性的方式挤出 DNA 环。

Cohesin and condensin extrude DNA loops in a cell cycle-dependent manner.

机构信息

Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany.

Max Planck Institute for the Physics of Complex Systems, Dresden, Germany.

出版信息

Elife. 2020 May 12;9:e53885. doi: 10.7554/eLife.53885.

DOI:10.7554/eLife.53885
PMID:32396063
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7316503/
Abstract

Loop extrusion by structural maintenance of chromosomes (SMC) complexes has been proposed as a mechanism to organize chromatin in interphase and metaphase. However, the requirements for chromatin organization in these cell cycle phases are different, and it is unknown whether loop extrusion dynamics and the complexes that extrude DNA also differ. Here, we used egg extracts to reconstitute and image loop extrusion of single DNA molecules during the cell cycle. We show that loops form in both metaphase and interphase, but with distinct dynamic properties. Condensin extrudes DNA loops non-symmetrically in metaphase, whereas cohesin extrudes loops symmetrically in interphase. Our data show that loop extrusion is a general mechanism underlying DNA organization, with dynamic and structural properties that are biochemically regulated during the cell cycle.

摘要

结构维持染色体(SMC)复合物的环挤出已被提议作为一种在间期中组织染色质的机制。然而,这些细胞周期阶段对染色质组织的要求不同,并且尚不清楚环挤出动力学和挤出 DNA 的复合物是否也不同。在这里,我们使用卵提取物在细胞周期中重新构建和成像单个 DNA 分子的环挤出。我们表明,环在中期和间期都形成,但具有不同的动态特性。在中期,凝聚素非对称地挤出 DNA 环,而在间期,黏合蛋白对称地挤出环。我们的数据表明,环挤出是一种普遍的 DNA 组织机制,其动力学和结构特性在细胞周期中受到生化调控。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/c8d6c8b7167f/elife-53885-resp-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/5c5483f7c88f/elife-53885-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/3b7bcb8e01ff/elife-53885-fig1-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/cf2375d93135/elife-53885-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/315b21a3a143/elife-53885-fig2-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/9236445ffef2/elife-53885-fig2-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/2b0e724bf079/elife-53885-fig2-figsupp3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/195d9c4ed9e1/elife-53885-fig2-figsupp4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/5375409f0128/elife-53885-fig2-figsupp5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/1941aab2c531/elife-53885-fig2-figsupp6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/6ed420a8045e/elife-53885-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/9a153d5572cb/elife-53885-fig3-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/c8d6c8b7167f/elife-53885-resp-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/5c5483f7c88f/elife-53885-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/3b7bcb8e01ff/elife-53885-fig1-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/cf2375d93135/elife-53885-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/315b21a3a143/elife-53885-fig2-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/9236445ffef2/elife-53885-fig2-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/2b0e724bf079/elife-53885-fig2-figsupp3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/195d9c4ed9e1/elife-53885-fig2-figsupp4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/5375409f0128/elife-53885-fig2-figsupp5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/1941aab2c531/elife-53885-fig2-figsupp6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/6ed420a8045e/elife-53885-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/9a153d5572cb/elife-53885-fig3-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/7316503/c8d6c8b7167f/elife-53885-resp-fig1.jpg

相似文献

1
Cohesin and condensin extrude DNA loops in a cell cycle-dependent manner.黏合蛋白和凝聚蛋白以细胞周期依赖性的方式挤出 DNA 环。
Elife. 2020 May 12;9:e53885. doi: 10.7554/eLife.53885.
2
Condensins and cohesins - one of these things is not like the other!凝聚素和黏合素——两者并不相同!
J Cell Sci. 2019 Feb 7;132(3):jcs220491. doi: 10.1242/jcs.220491.
3
Genome folding through loop extrusion by SMC complexes.通过 SMC 复合物的环伸出进行基因组折叠。
Nat Rev Mol Cell Biol. 2021 Jul;22(7):445-464. doi: 10.1038/s41580-021-00349-7. Epub 2021 Mar 25.
4
Condensin minimizes topoisomerase II-mediated entanglements of DNA in vivo.凝聚素最小化了拓扑异构酶 II 在体内介导的 DNA 缠绕。
EMBO J. 2021 Jan 4;40(1):e105393. doi: 10.15252/embj.2020105393. Epub 2020 Nov 6.
5
Cohesin-Dependent Loop Extrusion: Molecular Mechanics and Role in Cell Physiology.黏连蛋白依赖的环挤出:分子力学及其在细胞生理学中的作用。
Biochemistry (Mosc). 2024 Apr;89(4):601-625. doi: 10.1134/S0006297924040023.
6
Geometric partitioning of cohesin and condensin is a consequence of chromatin loops.黏连蛋白和凝聚素的几何分区是染色质环的结果。
Mol Biol Cell. 2018 Nov 1;29(22):2737-2750. doi: 10.1091/mbc.E18-02-0131. Epub 2018 Sep 12.
7
Chromosome organization by one-sided and two-sided loop extrusion.染色体通过单侧和双侧环挤压进行组织。
Elife. 2020 Apr 6;9:e53558. doi: 10.7554/eLife.53558.
8
Taking cohesin and condensin in context.结合黏连蛋白和凝聚素来看。
PLoS Genet. 2018 Jan 25;14(1):e1007118. doi: 10.1371/journal.pgen.1007118. eCollection 2018 Jan.
9
Cohesins and condensins orchestrate the 4D dynamics of yeast chromosomes during the cell cycle.黏连蛋白和凝聚蛋白在细胞周期中协调酵母染色体的四维动态变化。
EMBO J. 2017 Sep 15;36(18):2684-2697. doi: 10.15252/embj.201797342. Epub 2017 Jul 20.
10
Cohesin mediates DNA loop extrusion by a "swing and clamp" mechanism.黏连蛋白通过“摇摆和夹钳”机制介导 DNA 环的挤压。
Cell. 2021 Oct 14;184(21):5448-5464.e22. doi: 10.1016/j.cell.2021.09.016. Epub 2021 Oct 7.

引用本文的文献

1
Calyculin A Induces Premature Chromosome Condensation and Chromatin Compaction in G-Phase HeLa Cells without Histone H1 Phosphorylation.毛喉素A在G期HeLa细胞中诱导过早染色体凝聚和染色质浓缩,且不伴有组蛋白H1磷酸化。
bioRxiv. 2025 Jul 21:2025.07.16.665228. doi: 10.1101/2025.07.16.665228.
2
Functional interplay between condensin I and topoisomerase Iiα in single-molecule DNA compaction.凝缩蛋白I与拓扑异构酶IIα在单分子DNA压缩中的功能相互作用。
Nat Commun. 2025 Aug 6;16(1):7239. doi: 10.1038/s41467-025-62600-5.
3
The length and strength of compartmental interactions are modulated by condensin II activity.

本文引用的文献

1
Single-molecule imaging reveals control of parental histone recycling by free histones during DNA replication.单分子成像揭示了在 DNA 复制过程中游离组蛋白对亲本组蛋白回收的控制。
Sci Adv. 2020 Sep 18;6(38). doi: 10.1126/sciadv.abc0330. Print 2020 Sep.
2
Human Condensin I and II Drive Extensive ATP-Dependent Compaction of Nucleosome-Bound DNA.人源凝聚素 I 和 II 驱动核小体结合 DNA 的广泛 ATP 依赖性紧缩。
Mol Cell. 2020 Jul 2;79(1):99-114.e9. doi: 10.1016/j.molcel.2020.04.026. Epub 2020 May 22.
3
Chromosome organization by one-sided and two-sided loop extrusion.
凝缩素II的活性调节了区室间相互作用的长度和强度。
PLoS Genet. 2025 Jul 1;21(7):e1011724. doi: 10.1371/journal.pgen.1011724. eCollection 2025 Jul.
4
Mitotic genome folding.有丝分裂基因组折叠
J Cell Biol. 2025 Jul 7;224(7). doi: 10.1083/jcb.202504075. Epub 2025 Jun 10.
5
Nanoscale DNA tracing reveals the self-organization mechanism of mitotic chromosomes.纳米级DNA追踪揭示有丝分裂染色体的自组装机制。
Cell. 2025 May 15;188(10):2656-2669.e17. doi: 10.1016/j.cell.2025.02.028. Epub 2025 Mar 24.
6
Increasingly efficient chromatin binding of cohesin and CTCF supports chromatin architecture formation during zebrafish embryogenesis.在斑马鱼胚胎发生过程中,黏连蛋白和CTCF与染色质的结合效率不断提高,这有助于染色质结构的形成。
Nat Commun. 2025 Feb 21;16(1):1833. doi: 10.1038/s41467-025-56889-5.
7
How Chromatin Motor Complexes Influence the Nuclear Architecture: A Review of Chromatin Organization, Cohesins, and Condensins with a Focus on .染色质运动复合体如何影响核结构:关于染色质组织、黏连蛋白和凝聚蛋白的综述,重点关注…… (原文此处不完整)
DNA (Basel). 2024 Mar;4(1):84-103. doi: 10.3390/dna4010005. Epub 2024 Mar 11.
8
All eukaryotic SMC proteins induce a twist of -0.6 at each DNA loop extrusion step.所有真核生物的结构维持染色体(SMC)蛋白在每个DNA环挤出步骤中都会诱导-0.6的扭曲。
Sci Adv. 2024 Dec 13;10(50):eadt1832. doi: 10.1126/sciadv.adt1832.
9
Loop Extrusion Machinery Impairments in Models and Disease.环路挤出机械损伤的模型与疾病。
Cells. 2024 Nov 17;13(22):1896. doi: 10.3390/cells13221896.
10
The chromosome folding problem and how cells solve it.染色体折叠问题及其解决方法。
Cell. 2024 Nov 14;187(23):6424-6450. doi: 10.1016/j.cell.2024.10.026.
染色体通过单侧和双侧环挤压进行组织。
Elife. 2020 Apr 6;9:e53558. doi: 10.7554/eLife.53558.
4
Human cohesin compacts DNA by loop extrusion.人源黏连蛋白通过环挤出的方式压缩 DNA。
Science. 2019 Dec 13;366(6471):1345-1349. doi: 10.1126/science.aaz4475. Epub 2019 Nov 28.
5
DNA loop extrusion by human cohesin.人源黏连蛋白介导的 DNA 环挤出。
Science. 2019 Dec 13;366(6471):1338-1345. doi: 10.1126/science.aaz3418. Epub 2019 Nov 21.
6
A chromosome folding intermediate at the condensin-to-cohesin transition during telophase.在末期,着丝粒到黏连蛋白的转变过程中,一种染色体折叠的中间产物。
Nat Cell Biol. 2019 Nov;21(11):1393-1402. doi: 10.1038/s41556-019-0406-2. Epub 2019 Nov 4.
7
Organization of Chromosomal DNA by SMC Complexes.SMC 复合物对染色体 DNA 的组织作用。
Annu Rev Genet. 2019 Dec 3;53:445-482. doi: 10.1146/annurev-genet-112618-043633. Epub 2019 Oct 2.
8
Long-range enhancer-promoter contacts in gene expression control.长程增强子-启动子相互作用在基因表达调控中的作用。
Nat Rev Genet. 2019 Aug;20(8):437-455. doi: 10.1038/s41576-019-0128-0.
9
Organizational principles of 3D genome architecture.三维基因组结构的组织原则。
Nat Rev Genet. 2018 Dec;19(12):789-800. doi: 10.1038/s41576-018-0060-8.
10
Chromatin organization by an interplay of loop extrusion and compartmental segregation.染色质通过环挤出和隔室隔离的相互作用进行组织。
Proc Natl Acad Sci U S A. 2018 Jul 17;115(29):E6697-E6706. doi: 10.1073/pnas.1717730115. Epub 2018 Jul 2.