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通过高通量测序对野生和重新引入植物根际土壤中真菌多样性的比较分析

Comparative Analysis of Fungal Diversity in Rhizospheric Soil from Wild and Reintroduced Estimated via High-Throughput Sequencing.

作者信息

Shen Qingqing, Yang Junyu, Su Daifa, Li Zhiying, Xiao Wei, Wang Yongxia, Cui Xiaolong

机构信息

Yunnan Institute of Microbiology, School of Life Sciences, Yunnan University, Kunming, Yunnan 650091, China.

College of Environment and Resources, Wenshan University, Wenshan, Yunnan 663099, China.

出版信息

Plants (Basel). 2020 May 8;9(5):600. doi: 10.3390/plants9050600.

Abstract

is a critically endangered species and considered a "plant species with extremely small populations" (PSESP). It is an endemic species in southeastern Yunnan Province, China, with reproductive barriers. Rhizosphere fungi play a crucial role in plant growth and health. However, the composition, diversity, and function of fungal communities in wild and reintroduced rhizospheres remain unknown. In this study, Illumina sequencing of the internal transcribed spacer 2 (ITS2) region was used to analyze rhizospheric soil samples from wild and reintroduced . Thirteen phyla, 45 classes, 105 orders, 232 families, and 433 genera of fungi were detected. Basidiomycota and Ascomycota were dominant across all samples. The fungal community composition was similar between the wild and reintroduced rhizospheres, but the fungal taxa relative abundances differed. The fungal community richness was higher in the reintroduced rhizosphere than in the wild rhizosphere, but the diversity showed the opposite pattern. Soil nutrients and leaf litter significantly affected the fungal community composition and functional diversity. Here, the composition, structure, diversity, and ecological functions of the fungal communities in the rhizospheres of wild and reintroduced were elucidated for the first time, laying a foundation for future research and endangered species protection.

摘要

是一种极度濒危物种,被视为“极小种群植物物种”(PSESP)。它是中国云南省东南部的特有物种,存在生殖障碍。根际真菌在植物生长和健康中起着关键作用。然而,野生和再引入植株根际真菌群落的组成、多样性和功能仍然未知。在本研究中,利用内部转录间隔区2(ITS2)区域的Illumina测序分析了野生和再引入植株的根际土壤样本。检测到13个门、45个纲、105个目、232个科和433个属的真菌。担子菌门和子囊菌门在所有样本中占主导地位。野生和再引入植株根际的真菌群落组成相似,但真菌类群的相对丰度不同。再引入植株根际的真菌群落丰富度高于野生植株根际,但多样性呈现相反的模式。土壤养分和凋落物显著影响真菌群落组成和功能多样性。在此,首次阐明了野生和再引入植株根际真菌群落的组成、结构、多样性和生态功能,为未来的研究和濒危物种保护奠定了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fec5/7284792/45b95195f3ed/plants-09-00600-g001.jpg

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