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采用代谢组学和转录组学技术鉴定黄韧带骨化症的分子机制和诊断生物标志物。

Identification of the molecular mechanism and diagnostic biomarkers in the thoracic ossification of the ligamentum flavum using metabolomics and transcriptomics.

机构信息

Department of Orthopaedic Surgery, Peking Union Medical College Hospital, Peking Union Medical College and Chinese Academy of Medical Science, No. 1 Shuaifuyuan Dongdan, Dongcheng District, 100730, Beijing, P.R. China.

National Spinal Injuries Centre, Stoke Mandeville Hospital, Aylesbury, UK.

出版信息

BMC Mol Cell Biol. 2020 May 13;21(1):37. doi: 10.1186/s12860-020-00280-3.

Abstract

BACKGROUND

To establish a metabolite fingerprint of ossification of the thoracic ligamentum flavum (OTLF) patients using liquid chromatography-mass spectrometry (LC-MS) in combination with transcriptomic data and explore the potential molecular mechanism of pathogenesis.

RESULTS

The study cohort was composed of 25 patients with OTLF and 23 healthy volunteers as a control group. Thirty-seven metabolites were identified out by UPLC-MS including uric acid and hypoxanthine. Nine metabolites, including uric acid and hypoxanthine, were found with a Variable Importance in Projection (VIP) score over 1 (p < 0.05). Pathway enrichment indicated that purine metabolism pathways and the other four metabolism pathways were enriched. Transcriptomic data revealed that purine metabolism have a substantial change in gene expression of OTLF and that xanthine dehydrogenase (XDH) is the key regulatory factor. Receiver operating characteristic (ROC) analysis indicated that 17 metabolites, including uric acid, were found with an AUC value of over 0.7.

CONCLUSION

Uric acid might be the potential biomarker for OTLF and play an important role within the detailed pathway. XDH could affect purine metabolism by suppressing the expression of hypoxanthine and xanthine leading to low serum levels of uric acid in OTLF, which could be a focal point in developing new therapeutic methods for OTLF.

摘要

背景

采用液相色谱-质谱联用(LC-MS)结合转录组数据,建立胸韧带骨化症(OTLF)患者的代谢物特征指纹图谱,并探讨其发病机制的潜在分子机制。

结果

研究队列由 25 名 OTLF 患者和 23 名健康志愿者组成对照组。通过 UPLC-MS 鉴定出 37 种代谢物,包括尿酸和次黄嘌呤。有 9 种代谢物,包括尿酸和次黄嘌呤,其 VIP 得分超过 1(p<0.05)。途径富集表明,嘌呤代谢途径和其他四个代谢途径均有富集。转录组数据显示,嘌呤代谢在 OTLF 中的基因表达有明显变化,黄嘌呤脱氢酶(XDH)是关键调节因子。受试者工作特征(ROC)分析表明,包括尿酸在内的 17 种代谢物的 AUC 值超过 0.7。

结论

尿酸可能是 OTLF 的潜在生物标志物,并在详细的途径中发挥重要作用。XDH 通过抑制次黄嘌呤和黄嘌呤的表达来影响嘌呤代谢,导致 OTLF 患者血清尿酸水平降低,这可能是开发 OTLF 新治疗方法的重点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/7218621/ad2a969d08b0/12860_2020_280_Fig1_HTML.jpg

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