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J Bacteriol. 2019 Sep 20;201(20). doi: 10.1128/JB.00433-19. Print 2019 Oct 15.
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Dual pathways of tRNA hydroxylation ensure efficient translation by expanding decoding capability.tRNA 羟化的双重途径通过扩展解码能力确保高效翻译。
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Coenzyme Q biosynthesis in the biopesticide Shenqinmycin-producing Pseudomonas aeruginosa strain M18.生物农药申嗪霉素产生菌铜绿假单胞菌 M18 中的辅酶 Q 生物合成。
J Ind Microbiol Biotechnol. 2019 Jul;46(7):1025-1038. doi: 10.1007/s10295-019-02179-1. Epub 2019 Apr 12.
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NADH Dehydrogenases in Growth and Virulence.生长与毒力中的NADH脱氢酶
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Genetic, Biochemical, and Biophysical Methods for Studying FeS Proteins and Their Assembly.用于研究铁硫蛋白及其组装的遗传、生化和生物物理方法。
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泛醌生物合成的 O 独立途径对于 在 中的反硝化作用是必不可少的。

The O-independent pathway of ubiquinone biosynthesis is essential for denitrification in .

机构信息

Laboratoire de Chimie des Processus Biologiques, Collège de France, CNRS UMR 8229, PSL Research University, Sorbonne Université, Paris, France.

CNRS, CHU Grenoble Alpes, Grenoble INP, TIMC-IMAG, Université Grenoble Alpes, Grenoble, France.

出版信息

J Biol Chem. 2020 Jul 3;295(27):9021-9032. doi: 10.1074/jbc.RA120.013748. Epub 2020 May 14.

DOI:10.1074/jbc.RA120.013748
PMID:32409583
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7335794/
Abstract

Many proteobacteria, such as , contain two main types of quinones: benzoquinones, represented by ubiquinone (UQ) and naphthoquinones, such as menaquinone (MK), and dimethyl-menaquinone (DMK). MK and DMK function predominantly in anaerobic respiratory chains, whereas UQ is the major electron carrier in the reduction of dioxygen. However, this division of labor is probably not very strict. Indeed, a pathway that produces UQ under anaerobic conditions in an UbiU-, UbiV-, and UbiT-dependent manner has been discovered recently in Its physiological relevance is not yet understood, because MK and DMK are also present in Here, we established that UQ is the major quinone of and is required for growth under anaerobic respiration ( denitrification). We demonstrate that the ORFs , , and , which are homologs of the , , and genes, respectively, are essential for UQ biosynthesis and, thus, for denitrification in These three genes here are called , , and We show that UbiV accommodates an iron-sulfur [4Fe-4S] cluster. Moreover, we report that UbiU and UbiT can bind UQ and that the isoprenoid tail of UQ is the structural determinant required for recognition by these two Ubi proteins. Since the denitrification metabolism of is believed to be important for the pathogenicity of this bacterium in individuals with cystic fibrosis, our results highlight that the O-independent UQ biosynthetic pathway may represent a target for antibiotics development to manage infections.

摘要

许多变形菌门,如 ,包含两种主要的醌类:苯醌,以泛醌(UQ)为代表,和萘醌,如甲萘醌(MK)和二甲基甲萘醌(DMK)。MK 和 DMK 主要在无氧呼吸链中发挥作用,而 UQ 是氧还原的主要电子载体。然而,这种分工可能不是很严格。事实上,最近在 中发现了一种在无氧条件下依赖 UbiU、UbiV 和 UbiT 产生 UQ 的途径。其生理相关性尚不清楚,因为 MK 和 DMK 也存在于 中。在这里,我们确定 UQ 是 的主要醌类,是无氧呼吸(反硝化)生长所必需的。我们证明,ORF 、 和 分别是 、 和 基因的同源物,对于 UQ 生物合成以及因此对于 中的反硝化是必需的。这三个基因在这里被称为 、 和 。我们表明 UbiV 容纳一个铁硫 [4Fe-4S] 簇。此外,我们报告说 UbiU 和 UbiT 可以结合 UQ,并且 UQ 的异戊二烯尾部是这两种 Ubi 蛋白识别所需的结构决定因素。由于 的反硝化代谢被认为对囊性纤维化患者中该细菌的致病性很重要,因此我们的结果强调,O 独立的 UQ 生物合成途径可能是开发抗生素以管理 感染的目标。