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外伤性视神经病变模型的线粒体脂质分析数据

Mitochondrial lipid profiling data of a traumatic optic neuropathy model.

作者信息

Nuesi Ronaldo, Gallo Ryan A, Meehan Sean D, Nahas John V, Dvoriantchikova Galina, Pelaez Daniel, Bhattacharya Sanjoy K

机构信息

Department of Ophthalmology, Bascom Palmer Eye Institute, University of Miami Miller School of Medicine, Miami, FL 33136, USA.

Herbert Wertheim College of Medicine, Florida International University, Miami, FL 33199, USA.

出版信息

Data Brief. 2020 Apr 30;30:105649. doi: 10.1016/j.dib.2020.105649. eCollection 2020 Jun.

Abstract

Traumatic optic neuropathy (TON) is a degenerative process that occurs in a subset of patients following blunt force trauma to the head. This condition is characterized by retinal ganglion cell (RGC) death and axon degeneration within the optic nerve [1]. At the cellular level, mitochondrial changes are associated with many optic neuropathies [2, 3]. Here, we provide a dataset demonstrating changes in the optic nerve mitochondrial lipid profile of a sonication-induced traumatic optic neuropathy (SI-TON) mouse model at 1, 7, and 14 days after injury. 32 C57BL/6J mice were separated into 4 groups (control, 1, 7, and 14 days) of 8, with 4 males and 4 females in each. Mice were exposed to sonication-induced trauma as described previously (by Tao et al) and optic nerves were harvested at 1, 7, or 14 days following injury [4]. Mitochondria were isolated from homogenized optic nerves and lipids were extracted. Extracted mitochondrial lipids were analysed with a Q-Exactive Orbitrap Liquid Chromatography-Mass Spectrometer (LC MS-MS). Further analysis of raw data was conducted with LipidSearch 4.1.3 and Metaboanalyst 4.0. This data is publicly available at the Metabolomics Workbench, http://www.metabolomicsworkbench.org (Project ID: PR000905).

摘要

创伤性视神经病变(TON)是一种在头部受到钝性外力创伤的部分患者中发生的退行性过程。这种病症的特征是视网膜神经节细胞(RGC)死亡以及视神经内的轴突退化[1]。在细胞水平上,线粒体变化与许多视神经病变相关[2,3]。在此,我们提供了一个数据集,展示了超声诱导的创伤性视神经病变(SI-TON)小鼠模型在损伤后1天、7天和14天时视神经线粒体脂质谱的变化。32只C57BL/6J小鼠被分成4组(对照组、1天组、7天组和14天组),每组8只,每组中有4只雄性和4只雌性。小鼠如先前所述(由Tao等人)接受超声诱导的创伤,并在损伤后1天、7天或14天采集视神经[4]。从匀浆的视神经中分离出线粒体并提取脂质。用Q-Exactive Orbitrap液相色谱-质谱仪(LC MS-MS)分析提取的线粒体脂质。用LipidSearch 4.1.3和Metaboanalyst 4.0对原始数据进行进一步分析。该数据可在代谢组学工作台(http://www.metabolomicsworkbench.org)上公开获取(项目编号:PR000905)。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8ac7/7221166/57eb0046ce42/gr1.jpg

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