• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

视神经再生模型的脂质组学数据集。

Lipidomics dataset of optic nerve regeneration model.

作者信息

Arcuri Jennifer, Veldman Matthew B, Bhattacharya Sanjoy K

机构信息

Bascom Palmer Eye Institute, Miller School of Medicine at University of Miami, Miami, FL, 33136, USA.

Miami Integrative Metabolomics Research Center, Miami, FL, 33136, USA.

出版信息

Data Brief. 2021 Jul 14;37:107260. doi: 10.1016/j.dib.2021.107260. eCollection 2021 Aug.

DOI:10.1016/j.dib.2021.107260
PMID:34377754
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8327136/
Abstract

The right optic nerve of adult, 6 month to 1 year old, female and male were crushed and collected three days after. Matching controls of uninjured left optic nerves were also collected. The tissue was dissected from euthanized fish and frozen on dry ice. Samples were pooled for each category (female crush, female control, male crush, male control) n = 24 to obtain sufficient tissue for analysis. The brain from one male fish was also collected for control/calibration. Lipid extraction was done with the Bligh and Dyer [1] method, followed by untargeted liquid chromatography-mass spectrometry (LC MS-MS) lipid profiling using a Q-Exactive Orbitrap instrument coupled with Vanquish Horizon Binary UHPLC LC-MS system. The lipids were identified and quantified with LipidSearch 4.2.21 and the statistical analysis was conducted through Metaboanalyst 5.0. This data is available at Metabolomics Workbench, Study ID ST001725.

摘要

对成年(6个月至1岁)雌鱼和雄鱼的右侧视神经进行挤压,并在三天后收集样本。同时收集未受伤的左侧视神经作为匹配对照。组织取自安乐死的鱼,并在干冰上冷冻。将每个类别(雌性挤压组、雌性对照组、雄性挤压组、雄性对照组)的样本合并,每组n = 24,以获得足够的组织用于分析。还收集了一条雄鱼的大脑作为对照/校准样本。采用布莱和戴尔[1]法进行脂质提取,随后使用配备Vanquish Horizon二元超高效液相色谱-质谱系统的Q-Exactive Orbitrap仪器进行非靶向液相色谱-质谱联用(LC MS-MS)脂质谱分析。使用LipidSearch 4.2.21对脂质进行鉴定和定量,并通过Metaboanalyst 5.0进行统计分析。该数据可在代谢组学工作台获取,研究ID为ST001725。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabd/8327136/37b92c3dfdab/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabd/8327136/86b7e4772b27/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabd/8327136/adee5a65d9d5/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabd/8327136/cab03102b082/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabd/8327136/37b92c3dfdab/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabd/8327136/86b7e4772b27/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabd/8327136/adee5a65d9d5/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabd/8327136/cab03102b082/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabd/8327136/37b92c3dfdab/gr4.jpg

相似文献

1
Lipidomics dataset of optic nerve regeneration model.视神经再生模型的脂质组学数据集。
Data Brief. 2021 Jul 14;37:107260. doi: 10.1016/j.dib.2021.107260. eCollection 2021 Aug.
2
Metabolomics dataset of zebrafish optic nerve regeneration after injury.斑马鱼视神经损伤后再生的代谢组学数据集
Data Brief. 2023 Apr 18;48:109102. doi: 10.1016/j.dib.2023.109102. eCollection 2023 Jun.
3
Mass spectrometry dataset of LC-MS lipidomics analysis of optic nerve.视神经的液相色谱-质谱联用脂质组学分析的质谱数据集
Data Brief. 2023 Jun 14;49:109313. doi: 10.1016/j.dib.2023.109313. eCollection 2023 Aug.
4
Lipidomics dataset of PTEN deletion-induced optic nerve regeneration mouse model.PTEN缺失诱导的视神经再生小鼠模型的脂质组学数据集
Data Brief. 2020 Dec 26;34:106699. doi: 10.1016/j.dib.2020.106699. eCollection 2021 Feb.
5
Lipid profile dataset of optogenetics induced optic nerve regeneration.光遗传学诱导视神经再生的血脂谱数据集
Data Brief. 2020 Jul 5;31:106001. doi: 10.1016/j.dib.2020.106001. eCollection 2020 Aug.
6
Metabolomics dataset of mouse optogenetic axon regeneration after optic nerve crush.视神经挤压后小鼠光遗传学轴突再生的代谢组学数据集
Data Brief. 2022 May 21;42:108306. doi: 10.1016/j.dib.2022.108306. eCollection 2022 Jun.
7
Mitochondrial lipid profiling data of a traumatic optic neuropathy model.外伤性视神经病变模型的线粒体脂质分析数据
Data Brief. 2020 Apr 30;30:105649. doi: 10.1016/j.dib.2020.105649. eCollection 2020 Jun.
8
Lipidomics dataset of sonication-induced traumatic optic neuropathy in mice.小鼠超声诱导性外伤性视神经病变的脂质组学数据集
Data Brief. 2020 Jan 16;29:105147. doi: 10.1016/j.dib.2020.105147. eCollection 2020 Apr.
9
Data on changes in lipid profiles during the differentiation and maturation of human subcutaneous white adipocytes analyzed using chromatographic and bioinformatic tools.使用色谱和生物信息学工具分析的关于人类皮下白色脂肪细胞分化和成熟过程中脂质谱变化的数据。
Data Brief. 2022 May 6;42:108245. doi: 10.1016/j.dib.2022.108245. eCollection 2022 Jun.
10
Optic Nerve Lipidomics Reveal Impaired Glucosylsphingosine Lipids Pathway in Glaucoma.视神经脂质组学揭示了青光眼患者葡萄糖神经酰胺脂质代谢途径受损。
Invest Ophthalmol Vis Sci. 2019 Apr 1;60(5):1789-1798. doi: 10.1167/iovs.18-25802.

引用本文的文献

1
Mass spectrometry dataset of LC-MS lipidomics analysis of optic nerve.视神经的液相色谱-质谱联用脂质组学分析的质谱数据集
Data Brief. 2023 Jun 14;49:109313. doi: 10.1016/j.dib.2023.109313. eCollection 2023 Aug.
2
Protective mechanisms of a microbial oil against hypercholesterolemia: evidence from a zebrafish model.微生物油对高胆固醇血症的保护机制:来自斑马鱼模型的证据。
Front Nutr. 2023 Jun 26;10:1161119. doi: 10.3389/fnut.2023.1161119. eCollection 2023.
3
Identification of Target Proteins Involved in Cochlear Hair Cell Progenitor Cytotoxicity following Gentamicin Exposure.

本文引用的文献

1
Comparative lipid profiling dataset of the inflammation-induced optic nerve regeneration.炎症诱导的视神经再生的脂质谱比较数据集。
Data Brief. 2019 Apr 25;24:103950. doi: 10.1016/j.dib.2019.103950. eCollection 2019 Jun.
2
Detection of mercury in aquatic environments using EPRE reporter zebrafish.使用EPRE报告基因斑马鱼检测水生环境中的汞。
Mar Biotechnol (NY). 2008 Nov-Dec;10(6):750-7. doi: 10.1007/s10126-008-9113-x. Epub 2008 Jun 7.
3
A rapid method of total lipid extraction and purification.一种快速的总脂质提取与纯化方法。
庆大霉素暴露后参与耳蜗毛细胞祖细胞毒性的靶蛋白鉴定。
J Clin Med. 2022 Jul 14;11(14):4072. doi: 10.3390/jcm11144072.
4
Mass Spectrometry-Based Zebrafish Toxicometabolomics: A Review of Analytical and Data Quality Challenges.基于质谱的斑马鱼毒理代谢组学:分析与数据质量挑战综述
Metabolites. 2021 Sep 17;11(9):635. doi: 10.3390/metabo11090635.
Can J Biochem Physiol. 1959 Aug;37(8):911-7. doi: 10.1139/o59-099.