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海洋硅藻在高温和高浓度 CO 条件下的生物技术潜力。

The Biotechnological Potential of the Marine Diatom to the Elevated Temperature and CO Concentration.

机构信息

Research Centre for Indian Ocean Ecosystem, Tianjin University of Science and Technology, Tianjin 300457, China.

Tianjin Key Laboratory of Marine Resources and Chemistry, Tianjin University of Science and Technology, Tianjin 300457, China.

出版信息

Mar Drugs. 2020 May 15;18(5):259. doi: 10.3390/md18050259.

Abstract

Marine diatoms are promising candidates for biotechnological applications, since they contain high-value compounds, naturally. To facilitate the production of these compounds, stress conditions are often preferable; however, challenges remain with respect to maximizing a metabolic potential for the large-scale cultivation. Here, we sequenced the transcriptome of diatom under the actual (21 °C, 400 ppm) and elevated (25 °C, 1000 ppm) temperature and CO condition. Results indicated that cells grown at higher temperature and CO showed increasing growth rate, pigment composition, and biochemical productivity as did the expression of chlorophyll, carotenoid and bioactive compound related genes or transcripts. Furthermore, performing de novo transcriptome, we identified 32,884 transcript clusters and found 10,974 of them were differentially expressed between these two conditions. Analyzing the functions of differentially expressed transcripts, we found many of them involved in core metabolic and biosynthesis pathways, including chlorophyll metabolism, carotenoid, phenylpropanoid, phenylalanine and tyrosine, and flavonoid biosynthesis was upregulated. Moreover, we here demonstrated that utilizing a unique bio-fixation ability, is capable of suppressing central carbon metabolism to promote lipid productivity, fatty acid contents and other bioactive compounds under high temperature and CO treatment. Our study suggests that this species could be a potential candidate for wide-scale biotechnological applications under elevated temperature and CO conditions.

摘要

海洋硅藻是生物技术应用的有前途的候选者,因为它们天然含有高价值的化合物。为了促进这些化合物的生产,通常优选应激条件;然而,在大规模培养中最大限度地发挥代谢潜力方面仍然存在挑战。在这里,我们对 在实际(21°C,400 ppm)和升高(25°C,1000 ppm)温度和 CO 条件下的转录组进行了测序。结果表明,在较高温度和 CO 下生长的细胞表现出较高的生长速率、色素组成和生化生产力,以及叶绿素、类胡萝卜素和生物活性化合物相关基因或转录本的表达。此外,通过从头转录组分析,我们鉴定了 32884 个转录簇,并发现其中 10974 个在这两种条件下表达差异。分析差异表达转录本的功能,我们发现它们中的许多参与核心代谢和生物合成途径,包括叶绿素代谢、类胡萝卜素、苯丙烷、苯丙氨酸和酪氨酸以及类黄酮生物合成被上调。此外,我们在这里证明,利用独特的生物固定能力,能够抑制中心碳代谢,以在高温和 CO 处理下促进脂质生产力、脂肪酸含量和其他生物活性化合物的产生。我们的研究表明,该 物种可能是在升高的温度和 CO 条件下进行广泛生物技术应用的潜在候选者。

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