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重复的人为杂交揭示了海洋贻贝混合的平行模式。

Replicated anthropogenic hybridisations reveal parallel patterns of admixture in marine mussels.

作者信息

Simon Alexis, Arbiol Christine, Nielsen Einar Eg, Couteau Jérôme, Sussarellu Rossana, Burgeot Thierry, Bernard Ismaël, Coolen Joop W P, Lamy Jean-Baptiste, Robert Stéphane, Skazina Maria, Strelkov Petr, Queiroga Henrique, Cancio Ibon, Welch John J, Viard Frédérique, Bierne Nicolas

机构信息

ISEM Univ Montpellier CNRS EPHE IRD Montpellier France.

Section for Marine Living Resources National Institute of Aquatic Resources Technical University of Denmark Silkeborg Denmark.

出版信息

Evol Appl. 2019 Nov 22;13(3):575-599. doi: 10.1111/eva.12879. eCollection 2020 Mar.

Abstract

Human-mediated transport creates secondary contacts between genetically differentiated lineages, bringing new opportunities for gene exchange. When similar introductions occur in different places, they provide informally replicated experiments for studying hybridisation. We here examined 4,279 mussels, sampled in Europe and genotyped with 77 ancestry-informative markers. We identified a type of introduced mussels, called "dock mussels," associated with port habitats and displaying a particular genetic signal of admixture between and the Mediterranean lineage of . These mussels exhibit similarities in their ancestry compositions, regardless of the local native genetic backgrounds and the distance separating colonised ports. We observed fine-scale genetic shifts at the port entrance, at scales below natural dispersal distance. Such sharp clines do not fit with migration-selection tension zone models, and instead suggest habitat choice and early-stage adaptation to the port environment, possibly coupled with connectivity barriers. Variations in the spread and admixture patterns of dock mussels seem to be influenced by the local native genetic backgrounds encountered. We next examined departures from the average admixture rate at different loci, and compared human-mediated admixture events, to naturally admixed populations and experimental crosses. When the same background was involved, positive correlations in the departures of loci across locations were found; but when different backgrounds were involved, no or negative correlations were observed. While some observed positive correlations might be best explained by a shared history and saltatory colonisation, others are likely produced by parallel selective events. Altogether, genome-wide effect of admixture seems repeatable and more dependent on genetic background than environmental context. Our results pave the way towards further genomic analyses of admixture, and monitoring of the spread of dock mussels both at large and at fine spacial scales.

摘要

人类介导的运输在基因分化的谱系之间创造了二次接触,为基因交流带来了新机会。当类似的引入事件在不同地点发生时,它们为研究杂交提供了非正式的重复实验。我们在此研究了4279只贻贝,这些贻贝在欧洲采集,并使用77个祖先信息标记进行基因分型。我们鉴定出一种引入的贻贝类型,称为“码头贻贝”,与港口栖息地相关,并显示出与地中海谱系之间特定的混合遗传信号。这些贻贝在祖先组成上表现出相似性,无论当地的本地遗传背景以及被殖民港口之间的距离如何。我们在港口入口处观察到了精细尺度的基因变化,其尺度低于自然扩散距离。这种急剧的渐变不符合迁移 - 选择张力带模型,反而表明了对港口环境的栖息地选择和早期适应,可能还伴随着连通性障碍。码头贻贝的扩散和混合模式的变化似乎受到所遇到的当地本地遗传背景的影响。接下来,我们研究了不同位点偏离平均混合率的情况,并将人类介导的混合事件与自然混合种群和实验杂交进行了比较。当涉及相同的背景时,发现不同地点的位点偏离存在正相关;但当涉及不同背景时,则未观察到相关性或观察到负相关。虽然一些观察到的正相关可能最好由共同历史和跳跃式殖民来解释,但其他的可能是由平行选择事件产生的。总体而言,混合的全基因组效应似乎是可重复的,并且比环境背景更依赖于遗传背景。我们的结果为进一步进行混合的基因组分析以及在大尺度和精细空间尺度上监测码头贻贝的扩散铺平了道路。

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