Suppr超能文献

巴西患者肝母细胞瘤体细胞突变负担的见解

Insights Into the Somatic Mutation Burden of Hepatoblastomas From Brazilian Patients.

作者信息

Aguiar Talita Ferreira Marques, Rivas Maria Prates, Costa Silvia, Maschietto Mariana, Rodrigues Tatiane, Sobral de Barros Juliana, Barbosa Anne Caroline, Valieris Renan, Fernandes Gustavo R, Bertola Debora R, Cypriano Monica, Caminada de Toledo Silvia Regina, Major Angela, Tojal Israel, Apezzato Maria Lúcia de Pinho, Carraro Dirce Maria, Rosenberg Carla, Lima da Costa Cecilia Maria, Cunha Isabela W, Sarabia Stephen Frederick, Terrada Dolores-López, Krepischi Ana Cristina Victorino

机构信息

International Center for Research, A. C. Camargo Cancer Center, São Paulo, Brazil.

Department of Genetics and Evolutionary Biology, Human Genome and Stem-Cell Research Center, Institute of Biosciences, University of São Paulo, São Paulo, Brazil.

出版信息

Front Oncol. 2020 May 5;10:556. doi: 10.3389/fonc.2020.00556. eCollection 2020.

Abstract

Hepatoblastoma is a very rare embryonal liver cancer supposed to arise from the impairment of hepatocyte differentiation during embryogenesis. In this study, we investigated by exome sequencing the burden of somatic mutations in a cohort of 10 hepatoblastomas, including a congenital case. Our data disclosed a low mutational background and pointed out to a novel set of candidate genes for hepatoblastoma biology, which were shown to impact gene expression levels. Only three recurrently mutated genes were detected: and two novel candidates, and . A relevant finding was the identification of a recurrent mutation (A235G) in two hepatoblastomas at the gene; evaluation of RNA and protein expression revealed upregulation of in tumors. The analysis was replicated in two independents cohorts, substantiating that an activation of the pathway occurs in hepatoblastomas. In inflammatory regions of hepatoblastomas, CX3CL1/CX3CR1 were not detected in the infiltrated lymphocytes, in which they should be expressed in normal conditions, whereas necrotic regions exhibited negative labeling in tumor cells, but strongly positive infiltrated lymphocytes. Altogether, these data suggested that upregulation may be a common feature of hepatoblastomas, potentially related to chemotherapy response and progression. In addition, three mutational signatures were identified in hepatoblastomas, two of them with predominance of either the COSMIC signatures 1 and 6, found in all cancer types, or the COSMIC signature 29, mostly related to tobacco chewing habit; a third novel mutational signature presented an unspecific pattern with an increase of C>A mutations. Overall, we present here novel candidate genes for hepatoblastoma, with evidence that chemokine signaling pathway is likely involved with progression, besides reporting specific mutational signatures.

摘要

肝母细胞瘤是一种非常罕见的胚胎性肝癌,被认为起源于胚胎发育过程中肝细胞分化的受损。在本研究中,我们通过外显子组测序调查了包括1例先天性病例在内的10例肝母细胞瘤队列中的体细胞突变负担。我们的数据揭示了低突变背景,并指出了一组新的肝母细胞瘤生物学候选基因,这些基因被证明会影响基因表达水平。仅检测到三个反复突变的基因:以及两个新的候选基因和。一个相关的发现是在两个肝母细胞瘤的基因中鉴定出一个反复突变(A235G);对RNA和蛋白质表达的评估显示肿瘤中的上调。该分析在两个独立队列中重复进行,证实肝母细胞瘤中发生了通路的激活。在肝母细胞瘤的炎症区域,浸润淋巴细胞中未检测到CX3CL1/CX3CR1,而在正常情况下它们应该在这些细胞中表达,而坏死区域在肿瘤细胞中呈阴性标记,但浸润淋巴细胞呈强阳性。总之,这些数据表明上调可能是肝母细胞瘤的一个共同特征,可能与化疗反应和进展有关。此外,在肝母细胞瘤中鉴定出三种突变特征,其中两种主要是在所有癌症类型中都发现的COSMIC特征1和6,或者是主要与咀嚼烟草习惯相关的COSMIC特征29;第三种新的突变特征呈现出一种非特异性模式,C>A突变增加。总体而言,我们在此展示了肝母细胞瘤的新候选基因,有证据表明趋化因子信号通路可能与进展有关,此外还报告了特定的突变特征。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7a4/7214543/af83b8cf0b6b/fonc-10-00556-g0001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验