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利用韩国一个陈旧皮肤标本中的线粒体DNA对已灭绝的朝鲜豹进行系统发育研究。

Phylogenetic study of extirpated Korean leopard using mitochondrial DNA from an old skin specimen in South Korea.

作者信息

Hyun Jee Yun, Cho Jang Hyuk, Pandey Puneet, Min Mi-Sook, Kim Kyung Seok, Lee Hang

机构信息

Conservation Genome Resource Bank for Korean Wildlife (CGRB), Research Institute for Veterinary Science and College of Veterinary Medicine, Seoul National University, Seoul, Republic of Korea.

Tiger and Leopard Conservation Fund in Korea, Seoul, Republic of Korea.

出版信息

PeerJ. 2020 May 12;8:e8900. doi: 10.7717/peerj.8900. eCollection 2020.

Abstract

The leopard, , is a threatened species in its range throughout the world. Although, historically, the Korean Peninsula had a high population density of leopards, they were extirpated from South Korea by 1970, leaving almost no genetic specimens. Traditionally, Korean leopards are classified as ; however, their classification is based only on locality and morphology. Therefore, there is a need for genetic studies to identify the phylogenetic status of Korean leopards at the subspecies level. Presently, no extant wild specimen is available from South Korea; therefore, we extracted genetic material from the old skin of a leopard captured in Jirisan, South Korea in the 1930s and conducted the first phylogenetic study of the South Korean leopard. A total of 726 bp of mitochondrial DNA, including segments of the NADH5 and control region, were amplified by PCR. A phylogenetic analysis of the fragment, along with sequences of nine leopard subspecies from GenBank revealed that the extinct South Korean leopard belonged to the Asian leopard group and in the same clade as the Amur leopard (). Thus, the leopard that inhabited South Korea in the past was of the same subspecies as the Amur leopard population currently inhabiting the transboundary region of Russia, China, and North Korea. These results emphasize the importance of conserving the endangered wild Amur leopard population (estimated to be about 60-80 individuals) in Russia and China, for future restoration of leopards in the Korean Peninsula.

摘要

豹在其全球分布范围内是一种受威胁物种。尽管历史上朝鲜半岛豹的种群密度很高,但到1970年它们在韩国已被灭绝,几乎没有留下遗传标本。传统上,朝鲜豹被归类为 ;然而,它们的分类仅基于地理位置和形态。因此,有必要进行遗传学研究以确定朝鲜豹在亚种水平上的系统发育地位。目前,韩国没有现存的野生标本;因此,我们从20世纪30年代在韩国智异山捕获的一只豹的旧皮中提取了遗传物质,并对韩国豹进行了首次系统发育研究。通过PCR扩增了总共726 bp的线粒体DNA,包括NADH5和控制区的片段。对该片段以及来自GenBank的九个豹亚种的序列进行系统发育分析表明,已灭绝的韩国豹属于亚洲豹群,与东北豹( )属于同一分支。因此,过去栖息在韩国的豹与目前栖息在俄罗斯、中国和朝鲜跨界地区的东北豹种群属于同一亚种。这些结果强调了保护俄罗斯和中国濒危野生东北豹种群(估计约60 - 80只个体)对于未来朝鲜半岛豹的恢复的重要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4471/7227655/84dfa2cac833/peerj-08-8900-g001.jpg

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