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系统分析环境化学物质对关键期可塑性相关基因表达的调控,揭示了模拟病原体免疫反应的常见途径。

Systematic Analysis of Environmental Chemicals That Dysregulate Critical Period Plasticity-Related Gene Expression Reveals Common Pathways That Mimic Immune Response to Pathogen.

机构信息

Department of Psychiatry, Icahn School of Medicine at Mount Sinai, 1 Gustave L Levy Place, New York NY 10029, USA.

Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, 1 Gustave L Levy Place, New York NY 10029, USA.

出版信息

Neural Plast. 2020 May 5;2020:1673897. doi: 10.1155/2020/1673897. eCollection 2020.

Abstract

The tens of thousands of industrial and synthetic chemicals released into the environment have an unknown but potentially significant capacity to interfere with neurodevelopment. Consequently, there is an urgent need for systematic approaches that can identify disruptive chemicals. Little is known about the impact of environmental chemicals on critical periods of developmental neuroplasticity, in large part, due to the challenge of screening thousands of chemicals. Using an integrative bioinformatics approach, we systematically scanned 2001 environmental chemicals and identified 50 chemicals that consistently dysregulate two transcriptional signatures of critical period plasticity. These chemicals included pesticides (e.g., pyridaben), antimicrobials (e.g., bacitracin), metals (e.g., mercury), anesthetics (e.g., halothane), and other chemicals and mixtures (e.g., vehicle emissions). Application of a chemogenomic enrichment analysis and hierarchical clustering across these diverse chemicals identified two clusters of chemicals with one that mimicked an immune response to pathogen, implicating inflammatory pathways and microglia as a common chemically induced neuropathological process. Thus, we established an integrative bioinformatics approach to systematically scan thousands of environmental chemicals for their ability to dysregulate molecular signatures relevant to critical periods of development.

摘要

数万种释放到环境中的工业和合成化学品具有未知但可能具有重大影响的能力,可以干扰神经发育。因此,迫切需要能够识别干扰化学物质的系统方法。由于筛选数千种化学物质的挑战,人们对环境化学物质对发育神经可塑性关键期的影响知之甚少。我们使用综合生物信息学方法,系统地扫描了 2001 种环境化学物质,并确定了 50 种化学物质,这些化学物质能够一致地上调关键期可塑性的两个转录特征。这些化学物质包括杀虫剂(例如,哒螨灵)、抗生素(例如,杆菌肽)、金属(例如,汞)、麻醉剂(例如,氟烷)以及其他化学物质和混合物(例如,车辆排放物)。对这些不同化学物质的化学基因组富集分析和层次聚类的应用确定了具有两个化学物质簇的聚类,其中一个簇模拟了对病原体的免疫反应,暗示炎症途径和小胶质细胞是常见的化学诱导神经病理学过程。因此,我们建立了一种综合生物信息学方法,系统地扫描数千种环境化学物质,以研究它们扰乱与发育关键期相关的分子特征的能力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c60c/7222500/4086877d9fe3/NP2020-1673897.001.jpg

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