Shioda Kayoko, Barclay Leslie, Becker-Dreps Sylvia, Bucardo-Rivera Filemon, Cooper Philip J, Payne Daniel C, Vinjé Jan, Lopman Benjamin A
Division of Viral Diseases, National Center for Immunization and Respiratory Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia.
School of Medicine, University of North Carolina at Chapel Hill.
Open Forum Infect Dis. 2017 Aug 3;4(3):ofx131. doi: 10.1093/ofid/ofx131. eCollection 2017 Summer.
Real-time reverse-transcriptase polymerase chain reaction (RT-PCR) is the state-of-the-art diagnostic for norovirus. Cycle threshold (Ct), an indicator of viral load, may be associated with symptomatic disease as well as demographic and outbreak characteristics.
Data on (1) outbreak and sporadic cases and (2) asymptomatic controls in the United States and Latin America were analyzed. With multivariate regression models, we assessed relationships between various factors and Ct values, and we calculated odds ratios (ORs) for the presence of symptoms and attributable fractions of norovirus. Receiver-operating characteristic analysis was performed to define an optimal Ct cutoff to identify disease-causing infections.
Cycle threshold values were lower (ie, higher viral loads) among symptomatic cases (model-adjusted mean ± standard error: 25.3 ± 1.2) compared with asymptomatic controls (28.5 ± 1.4). Cycle threshold values were significantly different across age groups, norovirus genogroups, timing of specimen collection, outbreak settings, and transmission modes. Genogroup II (GII) Ct values were associated with presence of symptoms (OR = 1.1), allowing us to estimate that 16% of diarrheal disease was attributable to norovirus. The optimized Ct cutoff led to poor sensitivity and specificity for genogroup I and GII.
Cycle threshold values were associated with host, pathogen, and outbreak factors. Cycle threshold values may not effectively distinguish disease-causing infection for individual patients, but they are useful for epidemiological studies aiming to attribute disease.
实时逆转录聚合酶链反应(RT-PCR)是诺如病毒的先进诊断方法。循环阈值(Ct)作为病毒载量的指标,可能与症状性疾病以及人口统计学和暴发特征相关。
分析了美国和拉丁美洲(1)暴发和散发病例以及(2)无症状对照的数据。通过多变量回归模型,我们评估了各种因素与Ct值之间的关系,并计算了出现症状的比值比(OR)和诺如病毒的归因分数。进行了受试者操作特征分析,以确定用于识别致病感染的最佳Ct临界值。
与无症状对照(28.5±1.4)相比,有症状病例的循环阈值较低(即病毒载量较高)(模型调整后的平均值±标准误:25.3±1.2)。不同年龄组、诺如病毒基因组、标本采集时间、暴发环境和传播方式的循环阈值存在显著差异。II组(GII)Ct值与症状出现相关(OR = 1.1),这使我们能够估计16%的腹泻病可归因于诺如病毒。优化后的Ct临界值对I组和GII组的敏感性和特异性较差。
循环阈值与宿主、病原体和暴发因素相关。循环阈值可能无法有效区分个体患者的致病感染,但它们对于旨在归因疾病的流行病学研究很有用。