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非靶向代谢组学揭示了在阳光照射相反的南极 cryptoendolithic 群落中进行的特定适应性选择。

Specific adaptations are selected in opposite sun exposed Antarctic cryptoendolithic communities as revealed by untargeted metabolomics.

机构信息

Department of Ecological and Biological Sciences, University of Tuscia, Viterbo, Italy.

Department of Science and Technology for Agriculture, Forestry, Nature and Energy, University of Tuscia, Viterbo, Italy.

出版信息

PLoS One. 2020 May 27;15(5):e0233805. doi: 10.1371/journal.pone.0233805. eCollection 2020.

Abstract

Antarctic cryptoendolithic communities are self-supporting borderline ecosystems spreading across the extreme conditions of the Antarctic desert and represent the predominant life-form in the ice-free areas of McMurdo Dry Valleys, accounted as the closest terrestrial Martian analogue. Components of these communities are highly adapted extremophiles and extreme-tolerant microorganisms, among the most resistant known to date. Recently, studies investigated biodiversity and community composition in these ecosystems but the metabolic activity of the metacommunity has never been investigated. Using an untargeted metabolomics, we explored stress-response of communities spreading in two sites of the same location, subjected to increasing environmental pressure due to opposite sun exposure, accounted as main factor influencing the diversity and composition of these ecosystems. Overall, 331 altered metabolites (206 and 125 unique for north and south, respectively), distinguished the two differently exposed communities. We also selected 10 metabolites and performed two-stage Receiver Operating Characteristic (ROC) analysis to test them as potential biomarkers. We further focused on melanin and allantoin as protective substances; their concentration was highly different in the community in the shadow or in the sun. These results clearly indicate that opposite insolation selected organisms in the communities with different adaptation strategies in terms of key metabolites produced.

摘要

南极 cryptoendolithic 群落是自给自足的边缘生态系统,分布在南极荒漠的极端条件下,代表了无冰麦克默多干谷极端环境中的主要生命形式,被认为是最接近火星的陆地模拟环境。这些群落的组成部分是高度适应的极端微生物和极端耐受的微生物,是迄今为止已知的最具抗性的微生物之一。最近,研究调查了这些生态系统中的生物多样性和群落组成,但从未研究过这些元群落的代谢活性。本研究使用无靶向代谢组学方法,研究了在同一地点两个不同地点扩散的群落的应激反应,由于阳光照射的不同,这些群落受到了越来越大的环境压力的影响,这被认为是影响这些生态系统多样性和组成的主要因素。总的来说,有 331 种代谢物发生了变化(北部分别为 206 种和 125 种独特代谢物),将两个不同暴露的群落区分开来。我们还选择了 10 种代谢物,并进行了两阶段接收器操作特征(ROC)分析,以测试它们作为潜在生物标志物的可能性。我们进一步关注黑色素和尿囊素作为保护物质;它们在阴影或阳光下的群落中的浓度差异很大。这些结果清楚地表明,相反的阳光照射选择了具有不同适应策略的群落中的生物体,这些适应策略表现在产生的关键代谢物上。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebf1/7253227/d4e058a88cc6/pone.0233805.g001.jpg

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