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干燥与复苏的以南极地衣为主的石内群落的代谢组学

Metabolomics of Dry Versus Reanimated Antarctic Lichen-Dominated Endolithic Communities.

作者信息

Fanelli Giuseppina, Coleine Claudia, Gevi Federica, Onofri Silvano, Selbmann Laura, Timperio Anna Maria

机构信息

Department of Ecological and Biological Sciences, University of Tuscia, 01100 Viterbo, Italy.

Italian National Antarctic Museum (MNA), Mycological Section, 16166 Genoa, Italy.

出版信息

Life (Basel). 2021 Jan 27;11(2):96. doi: 10.3390/life11020096.

Abstract

Cryptoendolithic communities are almost the sole life form in the ice-free areas of the Antarctic desert, encompassing among the most extreme-tolerant organisms known on Earth that still assure ecosystems functioning, regulating nutrient and biogeochemical cycles under conditions accounted as incompatible with active life. If high-throughput sequencing based studies are unravelling prokaryotic and eukaryotic diversity, they are not yet characterized in terms of stress adaptations and responses, despite their paramount ecological importance. In this study, we compared the responses of Antarctic endolithic communities, with special focus on fungi, both under dry conditions (i.e., when dormant), and after reanimation by wetting, light, and optimal temperature (15 °C). We found that several metabolites were differently expressed in reanimated opposite sun exposed communities, suggesting a critical role in their success. In particular, the saccharopine pathway was up-regulated in the north surface, while the spermine/spermidine pathway was significantly down-regulated in the shaded exposed communities. The carnitine-dependent pathway is up-regulated in south-exposed reanimated samples, indicating the preferential involvement of the B-oxidation for the functioning of TCA cycle. The role of these metabolites in the performance of the communities is discussed herein.

摘要

隐生内石生物群落几乎是南极沙漠无冰区域唯一的生命形式,包含地球上已知的最耐极端环境的生物,这些生物仍能确保生态系统的功能,在被认为与活跃生命不相容的条件下调节营养和生物地球化学循环。尽管基于高通量测序的研究正在揭示原核生物和真核生物的多样性,但它们在应激适应和反应方面尚未得到表征,尽管它们具有至关重要的生态意义。在本研究中,我们比较了南极隐生内石生物群落的反应,特别关注真菌,包括在干燥条件下(即处于休眠状态时)以及通过湿润、光照和最佳温度(15℃)复苏后的反应。我们发现,几种代谢物在复苏后的向阳和背阳群落中表达不同,这表明它们在群落成功中起关键作用。特别是,在北面表层,酵母氨酸途径上调,而在背阳群落中,精胺/亚精胺途径显著下调。在朝南复苏的样本中,肉碱依赖性途径上调,这表明三羧酸循环的运作优先涉及β-氧化。本文讨论了这些代谢物在群落表现中的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3adb/7911838/6323b7c03011/life-11-00096-g001.jpg

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