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来自人类X染色体的Bkm序列包含大量GATA/GACA重复序列簇。

Bkm sequences from the human X chromosome contain large clusters of GATA/GACA repeats.

作者信息

Erickson R P, Ross C E, Gorski J L, Stalvey J R, Drumm M M

机构信息

Department of Human Genetics, University of Michigan School of Medicine, Ann Arbor 48109-0618.

出版信息

Ann Hum Genet. 1988 Jul;52(3):167-76. doi: 10.1111/j.1469-1809.1988.tb01094.x.

DOI:10.1111/j.1469-1809.1988.tb01094.x
PMID:3250328
Abstract

In order to determine whether the regional localizations of Bkm repeats detected on the human X chromosome consisted of typical GATA/GACA repeats, clones were isolated, mapped, and sequenced. Nine Bkm-hybridizing clones from Kunkel's fluorescent-activated, cell-sorted X-chromosome library were all unique. Five were mapped in detail with restriction enzymes and the Bkm-hybridizing segments were localized. Confirmation of X chromosomal homology was obtained for 2 of the clones and Bkm segments from these 2 clones were sequenced. Seventeen contiguous GATA repeats were found in each clone and the overall repeat arrangement showed relatively few differences from previously sequenced Bkm sequences. These are the first sequences of human Bkm repeats. The results, when compared with previously published results, suggest that there may be significant differences between the organization of Bkm repeats on the human X and on the human Y chromosome.

摘要

为了确定在人类X染色体上检测到的Bkm重复序列的区域定位是否由典型的GATA/GACA重复序列组成,对克隆进行了分离、定位和测序。从昆克尔的荧光激活细胞分选X染色体文库中获得的9个与Bkm杂交的克隆都是独一无二的。其中5个克隆用限制性酶进行了详细定位,并确定了与Bkm杂交的片段的位置。对其中2个克隆进行了X染色体同源性确认,并对这2个克隆的Bkm片段进行了测序。在每个克隆中发现了17个连续的GATA重复序列,总体重复序列排列与先前测序的Bkm序列相比差异相对较小。这些是人类Bkm重复序列的首批序列。与先前发表的结果相比,这些结果表明人类X染色体和Y染色体上Bkm重复序列的组织可能存在显著差异。

相似文献

1
Bkm sequences from the human X chromosome contain large clusters of GATA/GACA repeats.来自人类X染色体的Bkm序列包含大量GATA/GACA重复序列簇。
Ann Hum Genet. 1988 Jul;52(3):167-76. doi: 10.1111/j.1469-1809.1988.tb01094.x.
2
Clustered GATA repeats (Bkm sequences) on the human Y chromosome.人类Y染色体上的成簇GATA重复序列(Bkm序列)。
Hum Genet. 1986 Aug;73(4):301-3. doi: 10.1007/BF00279090.
3
Banded krait minor-satellite (Bkm)-associated Y chromosome-specific repetitive DNA in mouse.小鼠中与带状环蛇小卫星(Bkm)相关的Y染色体特异性重复DNA。
Nucleic Acids Res. 1994 Jun 25;22(12):2289-95. doi: 10.1093/nar/22.12.2289.
4
Bkm sequences are polymorphic in humans and are clustered in pericentric regions of various acrocentric chromosomes including the Y.Bkm序列在人类中具有多态性,并聚集在包括Y染色体在内的各种近端着丝粒染色体的着丝粒周围区域。
Hum Genet. 1986 Aug;73(4):304-8. doi: 10.1007/BF00279091.
5
DNA fingerprinting in reptiles: Bkm hybridization patterns in Crocodilia and Chelonia.
Genome. 1991 Jun;34(3):472-6. doi: 10.1139/g91-071.
6
Characterization of GATA/GACA-related sequences on proximal chromosome 17 of the mouse.小鼠17号染色体近端GATA/GACA相关序列的特征分析
Chromosoma. 1989 Jan;97(4):301-6. doi: 10.1007/BF00371970.
7
The expression of the evolutionarily conserved GATA/GACA repeats in mouse tissues.进化保守的GATA/GACA重复序列在小鼠组织中的表达。
Chromosoma. 1986;93(6):496-501. doi: 10.1007/BF00386790.
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The organization of the evolutionarily conserved GATA/GACA repeats in the mouse genome.小鼠基因组中进化保守的GATA/GACA重复序列的组织方式。
Chromosoma. 1986;93(6):502-10. doi: 10.1007/BF00386791.
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BKm minisatellite sequences are not sex associated but reveal DNA fingerprint polymorphisms in rainbow trout.BKm微卫星序列与性别无关,但揭示了虹鳟鱼的DNA指纹多态性。
Genome. 1989 Oct;32(5):865-8. doi: 10.1139/g89-523.
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Nucleotide sequence analysis of a mouse Y chromosomal DNA fragment containing Bkm and LINE elements.包含Bkm和LINE元件的小鼠Y染色体DNA片段的核苷酸序列分析。
Genetica. 1992;87(1):7-15. doi: 10.1007/BF00128768.

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Variation in short tandem repeat sequences--a survey of twelve microsatellite loci for use as forensic identification markers.短串联重复序列的变异——用作法医鉴定标记的12个微卫星位点的调查
Int J Legal Med. 1994;107(1):13-20. doi: 10.1007/BF01247268.
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Heterogeneities in the distribution of (GACA)n simple repeats in the karyotypes of primates and mouse.灵长类动物和小鼠染色体组型中(GACA)n简单重复序列分布的异质性。
Hum Genet. 1990 Jul;85(2):187-94. doi: 10.1007/BF00193194.