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陆地植物线粒体基因组中外显子和内含子的蛋白质基因含量的变化。

Variation in protein gene and intron content among land plant mitogenomes.

机构信息

Center for Plant Science Innovation and Department of Agronomy and Horticulture, University of Nebraska, Lincoln, NE.

出版信息

Mitochondrion. 2020 Jul;53:203-213. doi: 10.1016/j.mito.2020.06.002. Epub 2020 Jun 12.

Abstract

The functional content of the mitochondrial genome (mitogenome) is highly diverse across eukaryotes. Among land plants, our understanding of the variation in mitochondrial gene and intron content is improving from concerted efforts to densely sample mitogenomes from diverse land plants. Here I review the current state of knowledge regarding the diversity in content of protein genes and introns in the mitogenomes of all major land plant lineages. Mitochondrial protein gene content is largely conserved among mosses and liverworts, but it varies substantially among and within other land plant lineages due to convergent losses of genes encoding ribosomal proteins and, to a lesser extent, genes for proteins involved in cytochrome c maturation and oxidative phosphorylation. Mitochondrial intron content is fairly stable within each major land plant lineage, but highly variable among lineages, resulting from occasional gains and many convergent losses over time. Trans-splicing has evolved dozens of times in various vascular plant lineages, particularly those with relatively higher rates of mitogenomic rearrangement. Across eukaryotes, mitochondrial protein gene and intron content has been shaped massive convergent evolution.

摘要

线粒体基因组(mitogenome)的功能内容在真核生物中高度多样化。在陆地植物中,我们对线粒体基因和内含子含量变异的理解正在从密集采样各种陆地植物线粒体基因组的协同努力中得到提高。在这里,我回顾了关于所有主要陆地植物谱系的线粒体基因组中蛋白质基因和内含子含量多样性的现有知识状态。在苔藓植物和地钱中,线粒体蛋白基因的含量在很大程度上是保守的,但由于核糖体蛋白编码基因的趋同缺失,以及在较小程度上,与细胞色素 c 成熟和氧化磷酸化相关的蛋白质基因的趋同缺失,在其他陆地植物谱系中,其含量有很大的差异。在线粒体基因组的每个主要陆地植物谱系内,内含子的含量相对稳定,但在谱系之间变化很大,这是由于偶尔的获得和随着时间的推移发生的许多趋同缺失造成的。在各种维管植物谱系中,特别是在那些具有相对较高的线粒体基因组重排率的谱系中,反式剪接已经进化了几十次。在真核生物中,线粒体蛋白基因和内含子的含量已经受到了大规模趋同进化的影响。

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