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用于分析和控制酵母细胞过程的基因编码生物传感器。

Genetically-encoded biosensors for analyzing and controlling cellular process in yeast.

机构信息

Department of Chemical, Biochemical and Environmental Engineering, University of Maryland, Baltimore County, Baltimore, MD 21250, United States; Department of Agronomy and Plant Breeding, University of Guilan, Rasht, Islamic Republic of Iran.

Department of Chemical, Biochemical and Environmental Engineering, University of Maryland, Baltimore County, Baltimore, MD 21250, United States.

出版信息

Curr Opin Biotechnol. 2020 Aug;64:175-182. doi: 10.1016/j.copbio.2020.04.006. Epub 2020 Jun 18.

Abstract

Yeast has been a robust platform to manufacture a broad range of biofuels, commodity chemicals, natural products and pharmaceuticals. The membrane-bound organelles in yeast provide us the means to access the specialized metabolism for various biosynthetic applications. The separation and compartmentalization of genetic and metabolic events presents us the opportunity to precisely control and program gene expression for higher order biological functions. To further advance yeast synthetic biology platform, genetically encoded biosensors and actuators haven been engineered for in vivo monitoring and controlling cellular processes with spatiotemporal resolutions. The dynamic response, sensitivity and operational range of these genetically encoded sensors are determined by the regulatory architecture, dynamic assemly and interactions of the related proteins and genetic elements. This review provides an update of the basic design principles underlying the allosteric transcription factors, GPCR and optogenetics-based sensors, aiming to precisely analyze and control yeast cellular processes for various biotechnological applications.

摘要

酵母一直是制造广泛的生物燃料、大宗商品化学品、天然产物和药物的强大平台。酵母中的膜结合细胞器为我们提供了获取各种生物合成应用所需的特殊代谢途径的手段。遗传和代谢事件的分离和区室化为我们提供了精确控制和编程基因表达以实现更高阶生物功能的机会。为了进一步推进酵母合成生物学平台,已设计了遗传编码的生物传感器和执行器,用于具有时空分辨率的体内监测和控制细胞过程。这些遗传编码传感器的动态响应、灵敏度和工作范围取决于相关蛋白质和遗传元件的调节结构、动态组装和相互作用。本综述提供了变构转录因子、GPCR 和基于光遗传学的传感器的基本设计原理的最新更新,旨在精确分析和控制酵母细胞过程,以用于各种生物技术应用。

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