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通过克隆完整天然产物生物合成基因簇进行生物勘探。

Bioprospecting Through Cloning of Whole Natural Product Biosynthetic Gene Clusters.

作者信息

Lin Zhenquan, Nielsen Jens, Liu Zihe

机构信息

Beijing Advanced Innovation Center for Soft Matter Science and Engineering, College of Life Science and Technology, Beijing University of Chemical Technology, Beijing, China.

Department of Biology and Biological Engineering, Chalmers University of Technology, Gothenburg, Sweden.

出版信息

Front Bioeng Biotechnol. 2020 Jun 5;8:526. doi: 10.3389/fbioe.2020.00526. eCollection 2020.

Abstract

Since the discovery of penicillin, natural products and their derivatives have been a valuable resource for drug discovery. With recent development of genome mining approaches in the post-genome era, a great number of natural product biosynthetic gene clusters (BGCs) have been identified and these can potentially be exploited for the discovery of novel natural products that can find application as pharmaceuticals. Since many BGCs are silent or do not express in native hosts under laboratory conditions, heterologous expression of BGCs in genetically tractable hosts becomes an attractive route to activate these BGCs to discover the corresponding products. Here, we highlight recent achievements in cloning and discovery of natural product biosynthetic pathways via intact BGC capturing, and discuss the prospects of high-throughput and multiplexed cloning of rational-designed gene clusters in the future.

摘要

自从青霉素被发现以来,天然产物及其衍生物一直是药物发现的宝贵资源。随着后基因组时代基因组挖掘方法的最新发展,大量天然产物生物合成基因簇(BGCs)已被鉴定出来,这些基因簇有可能被用于发现可作为药物应用的新型天然产物。由于许多BGCs在实验室条件下在天然宿主中是沉默的或不表达的,因此在遗传易处理的宿主中对BGCs进行异源表达成为激活这些BGCs以发现相应产物的一条有吸引力的途径。在这里,我们重点介绍了通过完整捕获BGCs在克隆和发现天然产物生物合成途径方面的最新成就,并讨论了未来合理设计的基因簇高通量和多重克隆的前景。

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