• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一种用于表征和筛选潜在神经血管单元毒性物的跨平台方法。

A cross-platform approach to characterize and screen potential neurovascular unit toxicants.

机构信息

U.S. Environmental Protection Agency, Office of Research and Development, Center for Computational Toxicology and Exposure, United States.

Leidos, United States.

出版信息

Reprod Toxicol. 2020 Sep;96:300-315. doi: 10.1016/j.reprotox.2020.06.010. Epub 2020 Jun 24.

DOI:10.1016/j.reprotox.2020.06.010
PMID:32590145
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9773816/
Abstract

Development of the neurovascular unit (NVU) is a complex, multistage process that requires orchestrated cell signaling mechanisms across several cell types and ultimately results in formation of the blood-brain barrier. Typical high-throughput screening (HTS) assays investigate single biochemical or single cell responses following chemical insult. As the NVU comprises multiple cell types interacting at various stages of development, a methodology combining high-throughput results across pertinent cell-based assays is needed to investigate potential chemical-induced disruption to the development of this complex cell system. To this end, we implemented a novel method for screening putative NVU disruptors across diverse assay platforms to predict chemical perturbation of the developing NVU. HTS assay results measuring chemical-induced perturbations to cellular key events across angiogenic and neurogenic outcomes in vitro were combined to create a cell-based prioritization of NVU hazard. Chemicals were grouped according to similar modes of action to train a logistic regression literature model on a training set of 38 chemicals. This model utilizes the chemical-specific pairwise mutual information score for PubMed MeSH annotations to represent a quantitative measure of previously published results. Taken together, this study presents a methodology to investigate NVU developmental hazard using cell-based HTS assays and literature evidence to prioritize screening of putative NVU disruptors towards a knowledge-driven characterization of neurovascular developmental toxicity. The results from these screening efforts demonstrate that chemicals representing a range of putative vascular disrupting compound (pVDC) scores can also produce effects on neurogenic outcomes and characterizes possible modes of action for disrupting the developing NVU.

摘要

神经血管单元 (NVU) 的发育是一个复杂的多阶段过程,需要协调几种细胞类型的细胞信号机制,最终导致血脑屏障的形成。典型的高通量筛选 (HTS) 检测方法研究化学损伤后单个生化或单个细胞的反应。由于 NVU 由多种细胞类型组成,这些细胞在不同的发育阶段相互作用,因此需要一种将高通量结果与相关基于细胞的检测相结合的方法,以研究潜在的化学物质对这个复杂细胞系统发育的干扰。为此,我们实施了一种新的方法,在多种检测平台上筛选潜在的 NVU 破坏剂,以预测化学物质对发育中的 NVU 的干扰。测量化学物质对体外血管生成和神经发生结果中细胞关键事件的诱导干扰的 HTS 检测结果被组合在一起,以基于细胞的方式对 NVU 危害进行优先级排序。根据类似的作用模式对化学品进行分组,以便在 38 种化学品的训练集上训练逻辑回归文献模型。该模型利用化学特异性两两互信息得分来表示 Pubmed MeSH 注释的定量度量,以表示先前发表结果的定量度量。总的来说,这项研究提出了一种使用基于细胞的 HTS 检测和文献证据来研究 NVU 发育危害的方法,以优先筛选潜在的 NVU 破坏剂,从而实现对神经血管发育毒性的知识驱动特征描述。这些筛选工作的结果表明,代表一系列潜在血管破坏化合物 (pVDC) 评分的化学品也可能对神经发生结果产生影响,并描述了破坏发育中的 NVU 的可能作用模式。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9ce/9773816/be482d9a2759/nihms-1679654-f0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9ce/9773816/e7aa340835eb/nihms-1679654-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9ce/9773816/8451c0896d35/nihms-1679654-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9ce/9773816/d440c9b265c5/nihms-1679654-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9ce/9773816/83a074e1bfd7/nihms-1679654-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9ce/9773816/c4094a422e21/nihms-1679654-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9ce/9773816/49d7383777e4/nihms-1679654-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9ce/9773816/be482d9a2759/nihms-1679654-f0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9ce/9773816/e7aa340835eb/nihms-1679654-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9ce/9773816/8451c0896d35/nihms-1679654-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9ce/9773816/d440c9b265c5/nihms-1679654-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9ce/9773816/83a074e1bfd7/nihms-1679654-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9ce/9773816/c4094a422e21/nihms-1679654-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9ce/9773816/49d7383777e4/nihms-1679654-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9ce/9773816/be482d9a2759/nihms-1679654-f0007.jpg

相似文献

1
A cross-platform approach to characterize and screen potential neurovascular unit toxicants.一种用于表征和筛选潜在神经血管单元毒性物的跨平台方法。
Reprod Toxicol. 2020 Sep;96:300-315. doi: 10.1016/j.reprotox.2020.06.010. Epub 2020 Jun 24.
2
Reconstituting neurovascular unit with primary neural stem cells and brain microvascular endothelial cells in three-dimensional matrix.在三维基质中用原代神经干细胞和脑微血管内皮细胞重建神经血管单元。
Brain Pathol. 2021 Sep;31(5):e12940. doi: 10.1111/bpa.12940. Epub 2021 Feb 12.
3
Neurovascular Organotypic Culture Models Using Induced Pluripotent Stem Cells to Assess Adverse Chemical Exposure Outcomes.使用诱导多能干细胞的神经血管器官型培养模型来评估化学物质暴露的不良后果。
Appl In Vitro Toxicol. 2019 Jun 1;5(2):92-110. doi: 10.1089/aivt.2018.0025. Epub 2019 Jun 17.
4
Screening for angiogenic inhibitors in zebrafish to evaluate a predictive model for developmental vascular toxicity.在斑马鱼中筛选血管生成抑制剂以评估发育性血管毒性的预测模型。
Reprod Toxicol. 2017 Jun;70:70-81. doi: 10.1016/j.reprotox.2016.12.004. Epub 2016 Dec 19.
5
Respirometric Screening and Characterization of Mitochondrial Toxicants Within the ToxCast Phase I and II Chemical Libraries.在 ToxCast 一期和二期化学文库中进行呼吸测定法筛选和线粒体毒物的特征分析。
Toxicol Sci. 2020 Jul 1;176(1):175-192. doi: 10.1093/toxsci/kfaa059.
6
Systems Modeling of Developmental Vascular Toxicity.发育性血管毒性的系统建模
Curr Opin Toxicol. 2019 Jun 1;15(1):55-63. doi: 10.1016/j.cotox.2019.04.004.
7
Modeling ischemic stroke in a triculture neurovascular unit on-a-chip.在三合一神经血管单元芯片上模拟缺血性中风。
Fluids Barriers CNS. 2021 Dec 14;18(1):59. doi: 10.1186/s12987-021-00294-9.
8
Computational toxicology as implemented by the U.S. EPA: providing high throughput decision support tools for screening and assessing chemical exposure, hazard and risk.美国环保署实施的计算毒理学:为筛选和评估化学暴露、危害和风险提供高通量决策支持工具。
J Toxicol Environ Health B Crit Rev. 2010 Feb;13(2-4):197-217. doi: 10.1080/10937404.2010.483935.
9
Testing for developmental neurotoxicity using a battery of in vitro assays for key cellular events in neurodevelopment.使用一组体外测定法检测神经发育过程中的关键细胞事件,以评估发育神经毒性。
Toxicol Appl Pharmacol. 2018 Sep 1;354:24-39. doi: 10.1016/j.taap.2018.04.001. Epub 2018 Apr 5.
10
Reconstituting neurovascular unit based on the close relations between neural stem cells and endothelial cells: an effective method to explore neurogenesis and angiogenesis.基于神经干细胞和内皮细胞之间的密切关系重建神经血管单元:探索神经发生和血管生成的有效方法。
Rev Neurosci. 2020 Jan 28;31(2):143-159. doi: 10.1515/revneuro-2019-0023.

引用本文的文献

1
Searching for LINCS to Stress: Using Text Mining to Automate Reference Chemical Curation.寻找 LINCS 应激反应:利用文本挖掘技术实现参考化学物质的自动编目。
Chem Res Toxicol. 2024 Jun 17;37(6):878-893. doi: 10.1021/acs.chemrestox.3c00335. Epub 2024 May 13.
2
Advances in computational methods along the exposure to toxicological response paradigm.计算方法的进步沿着毒理学反应范式的暴露。
Toxicol Appl Pharmacol. 2022 Sep 1;450:116141. doi: 10.1016/j.taap.2022.116141. Epub 2022 Jun 29.

本文引用的文献

1
Cross-talk between blood vessels and neural progenitors in the developing brain.发育中大脑血管与神经祖细胞之间的相互作用。
Neuronal Signal. 2018 Mar 30;2(1):NS20170139. doi: 10.1042/NS20170139. eCollection 2018 Mar.
2
Novel application of normalized pointwise mutual information (NPMI) to mine biomedical literature for gene sets associated with disease: use case in breast carcinogenesis.归一化逐点互信息(NPMI)在挖掘与疾病相关基因集的生物医学文献中的新应用:乳腺癌发生的案例分析
Comput Toxicol. 2018 Aug;7:46-57. doi: 10.1016/j.comtox.2018.06.003. Epub 2018 Jun 19.
3
Systems Modeling of Developmental Vascular Toxicity.
发育性血管毒性的系统建模
Curr Opin Toxicol. 2019 Jun 1;15(1):55-63. doi: 10.1016/j.cotox.2019.04.004.
4
Application of Microelectrode Array Approaches to Neurotoxicity Testing and Screening.微电极阵列方法在神经毒性测试与筛选中的应用。
Adv Neurobiol. 2019;22:275-297. doi: 10.1007/978-3-030-11135-9_12.
5
Workflow for defining reference chemicals for assessing performance of in vitro assays.用于评估体外分析性能的参考化学品定义工作流程。
ALTEX. 2019;36(2):261-276. doi: 10.14573/altex.1809281. Epub 2018 Dec 17.
6
The role of neurovascular unit damage in the occurrence and development of Alzheimer's disease.神经血管单元损伤在阿尔茨海默病发生发展中的作用。
Rev Neurosci. 2019 Jul 26;30(5):477-484. doi: 10.1515/revneuro-2018-0056.
7
Establishment of a murine culture system for modeling the temporal progression of cranial and trunk neural crest cell differentiation.建立用于模拟颅神经嵴和躯干神经嵴细胞分化时程进展的鼠类培养体系。
Dis Model Mech. 2018 Dec 12;11(12):dmm035097. doi: 10.1242/dmm.035097.
8
Blood-Brain Barrier: From Physiology to Disease and Back.血脑屏障:从生理学、疾病到治疗。
Physiol Rev. 2019 Jan 1;99(1):21-78. doi: 10.1152/physrev.00050.2017.
9
Development of the Concept for Stem Cell-Based Developmental Neurotoxicity Evaluation.基于干细胞的发育神经毒性评价概念的发展。
Toxicol Sci. 2018 Sep 1;165(1):14-20. doi: 10.1093/toxsci/kfy175.
10
ToxPi Graphical User Interface 2.0: Dynamic exploration, visualization, and sharing of integrated data models.ToxPi 图形用户界面 2.0:动态探索、可视化和集成数据模型的共享。
BMC Bioinformatics. 2018 Mar 5;19(1):80. doi: 10.1186/s12859-018-2089-2.