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2
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Nucleolin mediates microRNA-directed CSF-1 mRNA deadenylation but increases translation of CSF-1 mRNA.核仁素介导 microRNA 指导的 CSF-1 mRNA 去腺苷酸化,但增加 CSF-1 mRNA 的翻译。
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How does precursor RNA structure influence RNA processing and gene expression?前体 RNA 结构如何影响 RNA 加工和基因表达?
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本文引用的文献

1
The landscape of eukaryotic mRNPs.真核 mRNPs 的全景图。
RNA. 2020 Mar;26(3):229-239. doi: 10.1261/rna.073601.119. Epub 2019 Dec 26.
2
Revisiting the Closed-Loop Model and the Nature of mRNA 5'-3' Communication.重新审视闭环模型与mRNA 5'-3'通讯的本质
Mol Cell. 2018 Dec 6;72(5):805-812. doi: 10.1016/j.molcel.2018.10.047.
3
Structural and molecular mechanisms for the control of eukaryotic 5'-3' mRNA decay.真核生物 5'-3' mRNA 降解的结构和分子机制。
Nat Struct Mol Biol. 2018 Dec;25(12):1077-1085. doi: 10.1038/s41594-018-0164-z. Epub 2018 Dec 5.
4
Higher-Order Organization Principles of Pre-translational mRNPs.mRNA 前体颗粒的高级组织原则
Mol Cell. 2018 Nov 15;72(4):715-726.e3. doi: 10.1016/j.molcel.2018.09.012. Epub 2018 Nov 8.
5
Spatial Organization of Single mRNPs at Different Stages of the Gene Expression Pathway.单个 mRNPs 在基因表达途径不同阶段的空间组织。
Mol Cell. 2018 Nov 15;72(4):727-738.e5. doi: 10.1016/j.molcel.2018.10.010. Epub 2018 Nov 8.
6
mRNAs and lncRNAs intrinsically form secondary structures with short end-to-end distances.mRNA 和长链非编码 RNA 本质上形成具有短端到端距离的二级结构。
Nat Commun. 2018 Oct 18;9(1):4328. doi: 10.1038/s41467-018-06792-z.
7
mRNP architecture in translating and stress conditions reveals an ordered pathway of mRNP compaction.翻译:在翻译和应激条件下的 mRNP 结构揭示了 mRNP 紧缩的有序途径。
J Cell Biol. 2018 Dec 3;217(12):4124-4140. doi: 10.1083/jcb.201806183. Epub 2018 Oct 15.
8
COMRADES determines in vivo RNA structures and interactions.COMRADES 可用于体内 RNA 结构和相互作用的测定。
Nat Methods. 2018 Oct;15(10):785-788. doi: 10.1038/s41592-018-0121-0. Epub 2018 Sep 10.
9
Heterogeneity and specialized functions of translation machinery: from genes to organisms.翻译机器的异质性和专门功能:从基因到生物体。
Nat Rev Genet. 2018 Jul;19(7):431-452. doi: 10.1038/s41576-018-0008-z.
10
The GAIT translational control system.GAIT 翻译控制系统。
Wiley Interdiscip Rev RNA. 2018 Mar;9(2). doi: 10.1002/wrna.1441. Epub 2017 Nov 20.

收支平衡:mRNA 二级结构的新功能。

Making ends meet: New functions of mRNA secondary structure.

机构信息

Department of Biochemistry & Biophysics and Center for RNA Biology, School of Medicine and Dentistry, University of Rochester, Rochester, New York, USA.

出版信息

Wiley Interdiscip Rev RNA. 2021 Mar;12(2):e1611. doi: 10.1002/wrna.1611. Epub 2020 Jun 29.

DOI:10.1002/wrna.1611
PMID:32597020
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8107001/
Abstract

The 5' cap and 3' poly(A) tail of mRNA are known to synergistically regulate mRNA translation and stability. Recent computational and experimental studies revealed that both protein-coding and non-coding RNAs will fold with extensive intramolecular secondary structure, which will result in close distances between the sequence ends. This proximity of the ends is a sequence-independent, universal property of most RNAs. Only low-complexity sequences without guanosines are without secondary structure and exhibit end-to-end distances expected for RNA random coils. The innate proximity of RNA ends might have important biological implications that remain unexplored. In particular, the inherent compactness of mRNA might regulate translation initiation by facilitating the formation of protein complexes that bridge mRNA 5' and 3' ends. Additionally, the proximity of mRNA ends might mediate coupling of 3' deadenylation to 5' end mRNA decay. This article is categorized under: RNA Structure and Dynamics > RNA Structure, Dynamics, and Chemistry RNA Structure and Dynamics > Influence of RNA Structure in Biological Systems Translation > Translation Regulation.

摘要

mRNA 的 5' 帽和 3' 聚(A)尾协同调节 mRNA 的翻译和稳定性。最近的计算和实验研究表明,蛋白质编码和非编码 RNA 都会折叠成广泛的分子内二级结构,从而导致序列末端之间的距离非常接近。这种末端的接近是大多数 RNA 的一种非序列依赖的、普遍的特性。只有没有鸟嘌呤的低复杂度序列没有二级结构,表现出 RNA 无规卷曲的末端到末端的预期距离。RNA 末端的固有接近性可能具有尚未探索的重要生物学意义。特别是,mRNA 的固有紧凑性可能通过促进桥接 mRNA 5' 和 3' 末端的蛋白质复合物的形成来调节翻译起始。此外,mRNA 末端的接近可能介导 3' 脱腺苷酸化与 5' 端 mRNA 降解的偶联。本文属于以下类别:RNA 结构和动态 > RNA 结构、动态和化学 RNA 结构和动态 > RNA 结构对生物系统的影响 翻译 > 翻译调控。