• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

单个 mRNPs 在基因表达途径不同阶段的空间组织。

Spatial Organization of Single mRNPs at Different Stages of the Gene Expression Pathway.

机构信息

Département de Biochimie et Médecine Moléculaire, Université de Montréal, Montréal, QC H3T 1J4, Canada.

The Department of Biophysics and Biophysical Chemistry, the Solomon Snyder Department of Neuroscience, Center for Cell Dynamics, Johns Hopkins School of Medicine, Baltimore, MD 21224, USA.

出版信息

Mol Cell. 2018 Nov 15;72(4):727-738.e5. doi: 10.1016/j.molcel.2018.10.010. Epub 2018 Nov 8.

DOI:10.1016/j.molcel.2018.10.010
PMID:30415950
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6592633/
Abstract

mRNAs form ribonucleoprotein complexes (mRNPs) by association with proteins that are crucial for mRNA metabolism. While the mRNP proteome has been well characterized, little is known about mRNP organization. Using a single-molecule approach, we show that mRNA conformation changes depending on its cellular localization and translational state. Compared to nuclear mRNPs and lncRNPs, association with ribosomes decompacts individual mRNAs, while pharmacologically dissociating ribosomes or sequestering them into stress granules leads to increased compaction. Moreover, translating mRNAs rarely show co-localized 5' and 3' ends, indicating either that mRNAs are not translated in a closed-loop configuration, or that mRNA circularization is transient, suggesting that a stable closed-loop conformation is not a universal state for all translating mRNAs.

摘要

mRNA 通过与对 mRNA 代谢至关重要的蛋白质结合形成核糖核蛋白复合物 (mRNP)。虽然 mRNP 蛋白质组已经得到很好的描述,但对于 mRNP 的组织知之甚少。我们使用单分子方法表明,mRNA 的构象取决于其细胞定位和翻译状态。与核 mRNP 和 lncRNP 相比,与核糖体的结合会使单个 mRNA 解压缩,而药理学上分离核糖体或将其隔离到应激颗粒中会导致 mRNA 进一步压缩。此外,翻译的 mRNA 很少显示共定位的 5' 和 3' 端,这表明 mRNA 不是以闭环构型进行翻译,或者 mRNA 环化是短暂的,这表明稳定的闭环构象不是所有翻译的 mRNA 的普遍状态。

相似文献

1
Spatial Organization of Single mRNPs at Different Stages of the Gene Expression Pathway.单个 mRNPs 在基因表达途径不同阶段的空间组织。
Mol Cell. 2018 Nov 15;72(4):727-738.e5. doi: 10.1016/j.molcel.2018.10.010. Epub 2018 Nov 8.
2
Higher-Order Organization Principles of Pre-translational mRNPs.mRNA 前体颗粒的高级组织原则
Mol Cell. 2018 Nov 15;72(4):715-726.e3. doi: 10.1016/j.molcel.2018.09.012. Epub 2018 Nov 8.
3
mRNP architecture in translating and stress conditions reveals an ordered pathway of mRNP compaction.翻译:在翻译和应激条件下的 mRNP 结构揭示了 mRNP 紧缩的有序途径。
J Cell Biol. 2018 Dec 3;217(12):4124-4140. doi: 10.1083/jcb.201806183. Epub 2018 Oct 15.
4
Probing the Conformational State of mRNPs Using smFISH and SIM.使用单分子荧光原位杂交(smFISH)和结构光照明显微镜(SIM)探究信使核糖核蛋白(mRNPs)的构象状态
Methods Mol Biol. 2021;2209:267-286. doi: 10.1007/978-1-0716-0935-4_17.
5
The landscape of eukaryotic mRNPs.真核 mRNPs 的全景图。
RNA. 2020 Mar;26(3):229-239. doi: 10.1261/rna.073601.119. Epub 2019 Dec 26.
6
LARP4B is an AU-rich sequence associated factor that promotes mRNA accumulation and translation.LARP4B是一种富含AU序列的相关因子,可促进mRNA的积累和翻译。
RNA. 2015 Jul;21(7):1294-305. doi: 10.1261/rna.051441.115. Epub 2015 May 22.
7
P-bodies and stress granules: possible roles in the control of translation and mRNA degradation.P 体和应激颗粒:在翻译和 mRNA 降解控制中的可能作用。
Cold Spring Harb Perspect Biol. 2012 Sep 1;4(9):a012286. doi: 10.1101/cshperspect.a012286.
8
Integration of mRNP formation and export.信使核糖核蛋白(mRNP)形成与输出的整合。
Cell Mol Life Sci. 2017 Aug;74(16):2875-2897. doi: 10.1007/s00018-017-2503-3. Epub 2017 Mar 17.
9
The Clothes Make the mRNA: Past and Present Trends in mRNP Fashion.衣装造就信使核糖核酸:信使核糖核蛋白复合体的过去与当下趋势
Annu Rev Biochem. 2015;84:325-54. doi: 10.1146/annurev-biochem-080111-092106. Epub 2015 Mar 11.
10
Cytoplasmic mRNPs revisited: Singletons and condensates.细胞质 mRNPs 再探:单体和凝聚物。
Bioessays. 2020 Dec;42(12):e2000097. doi: 10.1002/bies.202000097. Epub 2020 Nov 4.

引用本文的文献

1
Controlling intermolecular base pairing in Drosophila germ granules by mRNA folding and its implications in fly development.通过mRNA折叠控制果蝇生殖颗粒中的分子间碱基配对及其对果蝇发育的影响。
Nat Commun. 2025 Aug 30;16(1):8135. doi: 10.1038/s41467-025-62973-7.
2
A time-resolved framework for the recruitment of mRNP processing and assembly factors to a site of transcription.一个用于将mRNA加工和组装因子招募到转录位点的时间分辨框架。
Nucleic Acids Res. 2025 Aug 11;53(15). doi: 10.1093/nar/gkaf798.
3
Functional Proximity across an mRNA.

本文引用的文献

1
The Exon Junction Complex Undergoes a Compositional Switch that Alters mRNP Structure and Nonsense-Mediated mRNA Decay Activity.外显子连接复合物经历组成性转换,改变 mRNP 结构和无义介导的 mRNA 衰变活性。
Cell Rep. 2018 Nov 27;25(9):2431-2446.e7. doi: 10.1016/j.celrep.2018.11.046. Epub 2018 Nov 19.
2
Higher-Order Organization Principles of Pre-translational mRNPs.mRNA 前体颗粒的高级组织原则
Mol Cell. 2018 Nov 15;72(4):715-726.e3. doi: 10.1016/j.molcel.2018.09.012. Epub 2018 Nov 8.
3
mRNAs and lncRNAs intrinsically form secondary structures with short end-to-end distances.
信使核糖核酸上的功能接近性
Biochemistry. 2025 Aug 12. doi: 10.1021/acs.biochem.5c00340.
4
FMRP drives mRNP targets into translationally silenced complexes.脆性X智力低下蛋白(FMRP)将信使核糖核蛋白(mRNP)靶标驱动到翻译沉默的复合物中。
Mol Cell. 2025 Jul 8. doi: 10.1016/j.molcel.2025.06.012.
5
Conserved long-range interactions are required for stable folding of orthoflaviviral genomic RNA.保守的长程相互作用是正黄病毒基因组RNA稳定折叠所必需的。
Nucleic Acids Res. 2025 Jun 6;53(11). doi: 10.1093/nar/gkaf514.
6
Ribosome association inhibits stress-induced gene mRNA localization to stress granules.核糖体结合抑制应激诱导基因mRNA定位于应激颗粒。
Genes Dev. 2025 Jul 1;39(13-14):826-848. doi: 10.1101/gad.352899.125.
7
The PCM scaffold enables RNA localization to centrosomes.PCM支架可使RNA定位于中心体。
Mol Biol Cell. 2025 Jun 1;36(6):ar75. doi: 10.1091/mbc.E25-03-0117. Epub 2025 Apr 30.
8
Post-Transcriptional Regulation of Gene Expression and the Intricate Life of Eukaryotic mRNAs.基因表达的转录后调控与真核生物mRNA的复杂生命历程
Wiley Interdiscip Rev RNA. 2025 Mar-Apr;16(2):e70007. doi: 10.1002/wrna.70007.
9
Expanding the tagging toolbox for visualizing translation live.扩展用于实时可视化翻译的标记工具集。
Biochem J. 2025 Jan 30;482(3):BCJ20240183. doi: 10.1042/BCJ20240183.
10
TrueSpot: A robust automated tool for quantifying signal puncta in fluorescent imaging.TrueSpot:一种用于在荧光成像中定量信号斑点的强大自动化工具。
bioRxiv. 2025 Jan 14:2025.01.10.632467. doi: 10.1101/2025.01.10.632467.
mRNA 和长链非编码 RNA 本质上形成具有短端到端距离的二级结构。
Nat Commun. 2018 Oct 18;9(1):4328. doi: 10.1038/s41467-018-06792-z.
4
mRNP architecture in translating and stress conditions reveals an ordered pathway of mRNP compaction.翻译:在翻译和应激条件下的 mRNP 结构揭示了 mRNP 紧缩的有序途径。
J Cell Biol. 2018 Dec 3;217(12):4124-4140. doi: 10.1083/jcb.201806183. Epub 2018 Oct 15.
5
High-throughput determination of RNA structures.高通量 RNA 结构测定。
Nat Rev Genet. 2018 Oct;19(10):615-634. doi: 10.1038/s41576-018-0034-x.
6
A brave new world of RNA-binding proteins.RNA 结合蛋白的崭新世界。
Nat Rev Mol Cell Biol. 2018 May;19(5):327-341. doi: 10.1038/nrm.2017.130. Epub 2018 Jan 17.
7
The Stress Granule Transcriptome Reveals Principles of mRNA Accumulation in Stress Granules.应激颗粒转录组揭示了应激颗粒中mRNA积累的原理。
Mol Cell. 2017 Nov 16;68(4):808-820.e5. doi: 10.1016/j.molcel.2017.10.015. Epub 2017 Nov 9.
8
The influence of microRNAs and poly(A) tail length on endogenous mRNA-protein complexes.miRNAs 和 poly(A) 尾长对内源性 mRNA-蛋白复合物的影响。
Genome Biol. 2017 Oct 31;18(1):211. doi: 10.1186/s13059-017-1330-z.
9
Potent neutralization of hepatitis A virus reveals a receptor mimic mechanism and the receptor recognition site.对甲型肝炎病毒的有效中和揭示了一种受体模拟机制和受体识别位点。
Proc Natl Acad Sci U S A. 2017 Jan 24;114(4):770-775. doi: 10.1073/pnas.1616502114. Epub 2017 Jan 10.
10
Single-cell profiling reveals that eRNA accumulation at enhancer-promoter loops is not required to sustain transcription.单细胞分析表明,增强子-启动子环处的eRNA积累并非维持转录所必需。
Nucleic Acids Res. 2017 Apr 7;45(6):3017-3030. doi: 10.1093/nar/gkw1220.