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白芨(兰科)转录组的从头测序及多糖生物合成相关基因的鉴定

De novo sequencing of Bletilla striata (Orchidaceae) transcriptome and identification of genes involved in polysaccharide biosynthesis.

作者信息

Niu Junfeng, Zhao Guangming, Mi Zeyuan, Chen Lijun, Liu Shuai, Wang Shiqiang, Wang Donghao, Wang Zhezhi

机构信息

Shaanxi Normal University, College of Life Sciences, Key Laboratory of the Ministry of Education for Medicinal Resources and Natural Pharmaceutical Chemistry, National Engineering Laboratory for Resource Development of Endangered Crude Drugs in Northwest of China, Xi'an, Shaanxi, China.

出版信息

Genet Mol Biol. 2020 Jun 26;43(3):e20190417. doi: 10.1590/1678-4685-GMB-2019-0417. eCollection 2020.

Abstract

Bletilla striata polysaccharide (BSP) is the main component of Bletilla striata, which has important pharmacological and pharmacological effects; however, due to the lack of genetic data, the metabolic pathways of BSP remain unclear. For this study, 11 representative resources of B. striata were analyzed, and the BSP contents of the different samples were significantly different; however, the monosaccharide composition of BSP was glucose and mannose. The representative samples were selected to observe their life history in situ, which were then divided and cultured in a greenhouse. Finally, samples from various organs of different plants were combined for transcriptome sequencing using the Illumina system. Our results summarized the BSP metabolic pathway, and we found that there were eight enzyme genes involved in biosynthesis, but these genes showed tissue specificity. Following qRT-PCR validation and comparative analysis, manA showed the highest expression; however, there were significant differences between the two germplasm resources in which the BSP content was significantly different, while UGP2, GPI, PMM, and GMPP had significant differences between the two samples. In summary, this study lays the foundation for further research into BSP metabolism and other physiological processes at the molecular level.

摘要

白及多糖(BSP)是白及的主要成分,具有重要的药理和药用作用;然而,由于缺乏遗传数据,BSP的代谢途径仍不清楚。本研究分析了11份白及代表性资源,不同样品的BSP含量存在显著差异;然而,BSP的单糖组成为葡萄糖和甘露糖。选择代表性样品原位观察其生活史,然后将其分割并在温室中培养。最后,将不同植株各器官的样品混合,使用Illumina系统进行转录组测序。我们的结果总结了BSP代谢途径,发现有8个酶基因参与生物合成,但这些基因具有组织特异性。经过qRT-PCR验证和比较分析,manA表达量最高;然而,在BSP含量差异显著的两种种质资源之间存在显著差异,而UGP2、GPI、PMM和GMPP在两个样品之间存在显著差异。总之,本研究为在分子水平上进一步研究BSP代谢及其他生理过程奠定了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f292/7315133/e8f58d5f3b09/1415-4757-GMB-43-3-e20190417-gf01.jpg

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