Suppr超能文献

确定 FECPAKG2、McMaster、Mini-FLOTAC 和 qPCR 检测中度至重度土壤传播性蠕虫感染的分类阈值。

Identifying thresholds for classifying moderate-to-heavy soil-transmitted helminth intensity infections for FECPAKG2, McMaster, Mini-FLOTAC and qPCR.

机构信息

Department of Virology, Parasitology and Immunology, Ghent University, Merelbeke, Belgium.

Center for Tropical Diseases, Sacro Cuore Don Calabria Hospital, Negrar, Italy.

出版信息

PLoS Negl Trop Dis. 2020 Jul 2;14(7):e0008296. doi: 10.1371/journal.pntd.0008296. eCollection 2020 Jul.

Abstract

The World Health Organization (WHO) has defined moderate-to-heavy intensity (M&HI) infections with soil-transmitted helminths (Ascaris lumbricoides, Trichuris trichiura and the two hookworms, Ancylostoma duodenale and Necator americanus) based on specific values of eggs per gram of stool, as measured by the Kato-Katz method. There are a variety of novel microscopy and DNA-based methods but it remains unclear whether applying current WHO thresholds on to these methods allows for a reliable classification of M&HI infections. We evaluated both WHO and method-specific thresholds for classifying the M&HI infections for novel microscopic (FECPAKG2, McMaster and Mini-FLOTAC) and DNA-based (qPCR) diagnostic methods. For this, we determined method-specific thresholds that best classified M&HI infections (defined by Kato-Katz and WHO thresholds; reference method) in two multi-country drug efficacy studies. Subsequently, we verified whether applying these method-specific thresholds improved the agreement in classifying M&HI infections compared to the reference method. When we applied the WHO thresholds, the new microscopic methods mainly misclassified M&HI as low intensity, and to a lesser extent low intensity infection as M&HI. For FECPAKG2, applying the method-specific thresholds significantly improved the agreement for Ascaris (moderate → substantial), Trichuris and hookworms (fair → moderate). For Mini-FLOTAC, a significantly improved agreement was observed for hookworms only (fair → moderate). For the other STHs, the agreement was almost perfect and remained unchanged. For McMaster, the method-specific thresholds revealed a fair to a substantial agreement but did not significantly improve the agreement. For qPCR, the method-specific thresholds based on genome equivalents per ml of DNA moderately agreed with the reference method for hookworm and Trichuris infections. For Ascaris, there was a substantial agreement. We defined method-specific thresholds that improved the classification of M&HI infections. Validation studies are required before they can be recommended for general use in assessing M&HI infections in programmatic settings.

摘要

世界卫生组织(WHO)根据 Kato-Katz 法检测粪便中每克粪便的虫卵数,定义了中度至重度感染(M&HI)的土壤传播性蠕虫(蛔虫、鞭虫和两种钩虫,十二指肠钩虫和美洲钩虫)。目前有多种新型显微镜和 DNA 检测方法,但尚不清楚将当前 WHO 阈值应用于这些方法是否能可靠地分类 M&HI 感染。我们评估了 WHO 标准和基于方法的阈值,用于对新型显微镜(FECPAKG2、McMaster 和 Mini-FLOTAC)和 DNA 检测(qPCR)方法进行 M&HI 感染的分类。为此,我们在两项多国药物疗效研究中,确定了最佳分类 M&HI 感染(由 Kato-Katz 和 WHO 标准定义;参考方法)的方法特异性阈值。随后,我们验证了应用这些方法特异性阈值是否能提高分类 M&HI 感染的一致性,与参考方法相比。当我们应用 WHO 阈值时,新型显微镜方法主要将 M&HI 错误分类为低强度,在较小程度上,将低强度感染错误分类为 M&HI。对于 FECPAKG2,应用方法特异性阈值可显著提高对蛔虫(中度→显著)、鞭虫和钩虫(公平→中度)的一致性。对于 Mini-FLOTAC,仅观察到钩虫的一致性显著提高(公平→中度)。对于其他 STH,一致性几乎是完美的,且没有变化。对于 McMaster,方法特异性阈值显示出公平到显著的一致性,但没有显著提高一致性。对于 qPCR,基于 DNA 基因组当量/ml 的方法特异性阈值对钩虫和鞭虫感染的分类与参考方法中度一致。对于蛔虫,一致性显著。我们定义了可以改善 M&HI 感染分类的方法特异性阈值。在推荐其在规划环境中用于评估 M&HI 感染的一般用途之前,需要进行验证研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c95e/7413557/05e8cc18fad1/pntd.0008296.g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验