Suppr超能文献

五功能 AROM 复合物的结构与功能动力学

Architecture and functional dynamics of the pentafunctional AROM complex.

机构信息

Department of Protein Evolution, Max Planck Institute for Developmental Biology, Tübingen, Germany.

Structural Plant Biology Laboratory, Department of Botany and Plant Biology, University of Geneva, Geneva, Switzerland.

出版信息

Nat Chem Biol. 2020 Sep;16(9):973-978. doi: 10.1038/s41589-020-0587-9. Epub 2020 Jul 6.

Abstract

The AROM complex is a multifunctional metabolic machine with ten enzymatic domains catalyzing the five central steps of the shikimate pathway in fungi and protists. We determined its crystal structure and catalytic behavior, and elucidated its conformational space using a combination of experimental and computational approaches. We derived this space in an elementary approach, exploiting an abundance of conformational information from its monofunctional homologs in the Protein Data Bank. It demonstrates how AROM is optimized for spatial compactness while allowing for unrestricted conformational transitions and a decoupled functioning of its individual enzymatic entities. With this architecture, AROM poses a tractable test case for the effects of active site proximity on the efficiency of both natural metabolic systems and biotechnological pathway optimization approaches. We show that a mere colocalization of enzymes is not sufficient to yield a detectable improvement of metabolic throughput.

摘要

AROM 复合体是一种多功能代谢机器,具有十个酶结构域,可催化真菌和原生动物中莽草酸途径的五个中心步骤。我们通过实验和计算相结合的方法确定了其晶体结构和催化行为,并阐明了其构象空间。我们通过一种基本方法推导出这个空间,利用其在蛋白质数据库中的单功能同源物中丰富的构象信息。它展示了 AROM 如何在允许无限制构象转变和其各个酶实体解耦功能的情况下,针对空间紧凑性进行优化。通过这种架构,AROM 为研究活性位点接近度对自然代谢系统和生物技术途径优化方法效率的影响提供了一个易于处理的测试案例。我们表明,仅仅将酶共定位并不足以显著提高代谢通量。

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验