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用于植物表型分析的动态对比

Dynamic Contrast for Plant Phenotyping.

作者信息

Kelemen Zsolt, Zhang Ruikang, Gissot Lionel, Chouket Raja, Bellec Yannick, Croquette Vincent, Jullien Ludovic, Faure Jean-Denis, Le Saux Thomas

机构信息

Université Paris-Saclay, INRAE, AgroParisTech, Institut Jean-Pierre Bourgin, F-78000 Versailles, France.

PASTEUR, Département de chimie, École normale supérieure, PSL University, SorbonneUniversité, CNRS, 24, rue Lhomond, 75005 Paris, France.

出版信息

ACS Omega. 2020 Jun 16;5(25):15105-15114. doi: 10.1021/acsomega.0c00957. eCollection 2020 Jun 30.

DOI:10.1021/acsomega.0c00957
PMID:32637783
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7331089/
Abstract

Noninvasiveness, minimal handling, and immediate response are favorable features of fluorescence readout for high-throughput phenotyping of labeled plants.Yet, remote fluorescence imaging may suffer from an autofluorescent background and artificial or natural ambient light. In this work, the latter limitations are overcome by adopting reversibly photoswitchable fluorescent proteins (RSFPs) as labels and Speed OPIOM (out-of-phase imaging after optical modulation), a fluorescence imaging protocol exploiting dynamic contrast. Speed OPIOM can efficiently distinguish the RSFP signal from autofluorescence and other spectrally interfering fluorescent reporters like GFP. It can quantitatively assess gene expressions, even when they are weak. It is as quantitative, sensitive, and robust in dark and bright light conditions. Eventually, it can be used to nondestructively record abiotic stress responses like water or iron limitations in real time at the level of individual plants and even of specific organs. Such Speed OPIOM validation could find numerous applications to identify plant lines in selection programs, design plants as environmental sensors, or ecologically monitor transgenic plants in the environment.

摘要

非侵入性、最少的操作以及即时响应是用于标记植物高通量表型分析的荧光读数的有利特征。然而,远程荧光成像可能会受到自发荧光背景以及人工或自然环境光的影响。在这项工作中,通过采用可逆光开关荧光蛋白(RSFP)作为标记以及Speed OPIOM(光学调制后的异相成像)克服了后一种限制,Speed OPIOM是一种利用动态对比度的荧光成像协议。Speed OPIOM能够有效地将RSFP信号与自发荧光以及其他光谱干扰荧光报告分子(如绿色荧光蛋白)区分开来。即使基因表达很微弱,它也能够对其进行定量评估。在黑暗和明亮光照条件下,它都具有定量、灵敏且稳健的特性。最终,它可用于在个体植物甚至特定器官水平实时无损记录非生物胁迫响应,如水或铁限制。这种Speed OPIOM验证在选择计划中鉴定植物品系、将植物设计为环境传感器或对环境中的转基因植物进行生态监测等方面有众多应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de0b/7331089/2f852e4d164f/ao0c00957_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de0b/7331089/aaa14a63caf9/ao0c00957_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de0b/7331089/5e8b72aaf438/ao0c00957_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de0b/7331089/5f350a29dfc9/ao0c00957_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de0b/7331089/ead98602ea5e/ao0c00957_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de0b/7331089/2f852e4d164f/ao0c00957_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de0b/7331089/aaa14a63caf9/ao0c00957_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de0b/7331089/5e8b72aaf438/ao0c00957_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de0b/7331089/5f350a29dfc9/ao0c00957_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de0b/7331089/ead98602ea5e/ao0c00957_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de0b/7331089/2f852e4d164f/ao0c00957_0005.jpg

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本文引用的文献

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2
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3
Optimization of fluorescent imaging in the operating room through pulsed acquisition and gating to ambient background cycling.
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Biomed Opt Express. 2017 Apr 26;8(5):2635-2648. doi: 10.1364/BOE.8.002635. eCollection 2017 May 1.
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Remote detection of buried landmines using a bacterial sensor.使用细菌传感器对埋藏地雷进行远程探测。
Nat Biotechnol. 2017 Apr 11;35(4):308-310. doi: 10.1038/nbt.3791.
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Selective gene dosage by CRISPR-Cas9 genome editing in hexaploid Camelina sativa.通过CRISPR-Cas9基因组编辑对六倍体亚麻荠进行选择性基因剂量调控
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Signature Optical Cues: Emerging Technologies for Monitoring Plant Health.标志性光学线索:监测植物健康的新兴技术
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