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基于候选基因分析发作性睡病的功能途径并构建基因-基因网络。

Analyzing Functional Pathways and constructing gene-gene network for Narcolepsy based on candidate genes.

机构信息

Department of Neuromedicine, Peking University People's Hospital, Beijing, China.

Department of Epidemiology and Biostatistics, School of Public Health, Peking University Health Science Center, Beijing, China.

出版信息

Int J Med Sci. 2020 Jun 15;17(11):1508-1514. doi: 10.7150/ijms.41812. eCollection 2020.

DOI:10.7150/ijms.41812
PMID:32669953
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7359385/
Abstract

To investigate the interactions among narcolepsy-associated genes and reveal the pathways these genes involved through bioinformatics analyses. The study was performed with the following steps: 1) Selected the previously discovered narcolepsy risk genes through literature review, 2) pathway enrichment analysis, and construction of gene-gene and protein-protein interaction (PPI) networks for narcolepsy. 1) GO analysis revealed the positive regulation of interferon-gamma production as the most enriched terms in biological process, and C-C chemokine receptor activity as the most enriched term in molecular function, 2) KEGG pathway enrichment analysis revealed selective enrichment of genes in cytokine-cytokine receptor interaction signaling pathways, and 3) five hub genes were identified ( and ). The bioinformatics results provide new insights into the molecular pathogenesis of narcolepsy and the identification of potential therapeutic targets for narcolepsy treatment.

摘要

为了探究嗜睡症相关基因之间的相互作用,并通过生物信息学分析揭示这些基因所涉及的通路。本研究按照以下步骤进行:1)通过文献回顾选择已发现的嗜睡症风险基因,2)进行通路富集分析,并构建嗜睡症的基因-基因和蛋白质-蛋白质相互作用(PPI)网络。1)GO 分析显示干扰素-γ产生的正调控是生物学过程中最富集的术语,C-C 趋化因子受体活性是分子功能中最富集的术语,2)KEGG 通路富集分析显示细胞因子-细胞因子受体相互作用信号通路中基因的选择性富集,3)鉴定出五个枢纽基因(和)。生物信息学结果为嗜睡症的分子发病机制提供了新的见解,并为嗜睡症治疗的潜在治疗靶点的识别提供了依据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fde/7359385/02dbec8c52a5/ijmsv17p1508g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fde/7359385/6ec42791a526/ijmsv17p1508g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fde/7359385/7ae60d5d044d/ijmsv17p1508g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fde/7359385/02dbec8c52a5/ijmsv17p1508g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fde/7359385/6ec42791a526/ijmsv17p1508g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fde/7359385/7ae60d5d044d/ijmsv17p1508g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fde/7359385/02dbec8c52a5/ijmsv17p1508g003.jpg

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