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转录组分析桂花对相对低温开花的响应。

Transcriptomic analysis of flower opening response to relatively low temperatures in Osmanthus fragrans.

机构信息

Zhejiang Provincial Key Laboratory of Germplasm Innovation and Utilization for Garden Plants, Key Laboratory of National Forestry and Grassland Administration on Germplasm Innovation and Utilization for Southern Garden Plants, School of Landscape Architecture, Zhejiang Agriculture and Forestry University, Hangzhou, 311300, Zhejiang, P.R. China.

出版信息

BMC Plant Biol. 2020 Jul 16;20(1):337. doi: 10.1186/s12870-020-02549-3.

Abstract

BACKGROUND

Sweet osmanthus (Osmanthus fragrans Lour.) is one of the top ten traditional ornamental flowers in China. The flowering time of once-flowering cultivars in O. fragrans is greatly affected by the relatively low temperature, but there are few reports on its molecular mechanism to date. A hypothesis had been raised that genes related with flower opening might be up-regulated in response to relatively low temperature in O. fragrans. Thus, our work was aimed to explore the underlying molecular mechanism of flower opening regulated by relatively low temperature in O. fragrans.

RESULTS

The cell size of adaxial and abaxial petal epidermal cells and ultrastructural morphology of petal cells at different developmental stages were observed. The cell size of adaxial and abaxial petal epidermal cells increased gradually with the process of flower opening. Then the transcriptomic sequencing was employed to analyze the differentially expressed genes (DEGs) under different number of days' treatments with relatively low temperatures (19 °C) or 23 °C. Analysis of DEGs in Gene Ontology analysis showed that "metabolic process", "cellular process", "binding", "catalytic activity", "cell", "cell part", "membrane", "membrane part", "single-organism process", and "organelle" were highly enriched. In KEGG analysis, "metabolic pathways", "biosynthesis of secondary metabolites", "plant-pathogen interaction", "starch and sucrose metabolism", and "plant hormone signal transduction" were the top five pathways containing the greatest number of DEGs. The DEGs involved in cell wall metabolism, phytohormone signal transduction pathways, and eight kinds of transcription factors were analyzed in depth.

CONCLUSIONS

Several unigenes involved in cell wall metabolism, phytohormone signal transduction pathway, and transcription factors with highly variable expression levels between different temperature treatments may be involved in petal cell expansion during flower opening process in response to the relatively low temperature. These results could improve our understanding of the molecular mechanism of relatively-low-temperature-regulated flower opening of O. fragrans, provide practical information for the prediction and regulation of flowering time in O. fragrans, and ultimately pave the way for genetic modification in O. fragrans.

摘要

背景

桂花(Osmanthus fragrans Lour.)是中国十大传统名花之一。一季开花品种的开花时间受低温影响较大,但目前关于其分子机制的报道较少。有人假设,在桂花中,与开花有关的基因可能会因低温而上调。因此,我们的工作旨在探索低温调控桂花开花的潜在分子机制。

结果

观察了不同发育阶段的上下表皮细胞的细胞大小和花瓣细胞的超微结构形态。随着开花过程的进行,上下表皮细胞的细胞大小逐渐增大。然后,采用转录组测序技术分析了在不同低温(19°C)或 23°C 处理天数下差异表达基因(DEGs)。基因本体分析显示,“代谢过程”“细胞过程”“结合”“催化活性”“细胞”“细胞部分”“膜”“膜部分”“单个生物过程”和“细胞器”等与 DEGs 高度相关。KEGG 分析表明,“代谢途径”“次生代谢物的生物合成”“植物-病原体相互作用”“淀粉和蔗糖代谢”和“植物激素信号转导”是包含最多 DEGs 的前 5 个途径。对细胞壁代谢、植物激素信号转导途径和 8 种转录因子涉及的 DEGs 进行了深入分析。

结论

低温处理下细胞壁代谢、植物激素信号转导途径和转录因子中一些表达水平变化较大的基因可能参与了花瓣细胞的扩张,从而导致低温下的开花。这些结果可以提高我们对桂花低温调控开花分子机制的认识,为桂花开花时间的预测和调控提供实际信息,并最终为桂花的遗传修饰铺平道路。

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