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通过PlaRoM实现对根系生长动态、侧根形成、根系结构和根毛发育的高通量表型分析。

High throughput phenotyping of root growth dynamics, lateral root formation, root architecture and root hair development enabled by PlaRoM.

作者信息

Yazdanbakhsh Nima, Fisahn Joachim

机构信息

Max Planck Institute of Molecular Plant Physiology, 14476 Potsdam Golm, Germany.

出版信息

Funct Plant Biol. 2009 Nov;36(11):938-946. doi: 10.1071/FP09167.

Abstract

Plant organ phenotyping by non-invasive video imaging techniques provides a powerful tool to assess physiological traits and biomass production. We describe here a range of applications of a recently developed plant root monitoring platform (PlaRoM). PlaRoM consists of an imaging platform and a root extension profiling software application. This platform has been developed for multi parallel recordings of root growth phenotypes of up to 50 individual seedlings over several days, with high spatial and temporal resolution. PlaRoM can investigate root extension profiles of different genotypes in various growth conditions (e.g. light protocol, temperature, growth media). In particular, we present primary root growth kinetics that was collected over several days. Furthermore, addition of 0.01% sucrose to the growth medium provided sufficient carbohydrates to maintain reduced growth rates in extended nights. Further analysis of records obtained from the imaging platform revealed that lateral root development exhibits similar growth kinetics to the primary root, but that root hairs develop in a faster rate. The compatibility of PlaRoM with currently accessible software packages for studying root architecture will be discussed. We are aiming for a global application of our collected root images to analytical tools provided in remote locations.

摘要

通过非侵入性视频成像技术对植物器官进行表型分析,为评估生理特征和生物量生产提供了一个强大的工具。我们在此描述了一种最近开发的植物根系监测平台(PlaRoM)的一系列应用。PlaRoM由一个成像平台和一个根系延伸分析软件应用程序组成。该平台已被开发用于在几天内对多达50株个体幼苗的根系生长表型进行多平行记录,具有高空间和时间分辨率。PlaRoM可以研究不同基因型在各种生长条件下(如光照方案、温度、生长培养基)的根系延伸情况。特别是,我们展示了几天内收集到的主根生长动力学。此外,在生长培养基中添加0.01%的蔗糖可提供足够的碳水化合物,以维持延长夜间缩短的生长速率。对从成像平台获得的记录进行的进一步分析表明,侧根发育与主根表现出相似的生长动力学,但根毛发育速度更快。将讨论PlaRoM与目前可用于研究根系结构的软件包的兼容性。我们的目标是将收集到的根系图像广泛应用于偏远地区提供的分析工具。

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