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通过SHP2(PTPN11)磷酸酶抑制剂评估细胞靶点结合情况。

Assessing Cellular Target Engagement by SHP2 (PTPN11) Phosphatase Inhibitors.

作者信息

Lambert Lester J, Romero Celeste, Sheffler Douglas J, Celeridad Maria, Cosford Nicholas D P, Tautz Lutz

机构信息

Cancer Metabolism & Signaling Networks Program, NCI-Designated Cancer Center, Sanford Burnham Prebys Medical Discovery Institute.

Cancer Metabolism & Signaling Networks Program, NCI-Designated Cancer Center, Sanford Burnham Prebys Medical Discovery Institute;

出版信息

J Vis Exp. 2020 Jul 17(161). doi: 10.3791/61457.

DOI:10.3791/61457
PMID:32744526
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8080703/
Abstract

The Src-homology 2 (SH2) domain-containing phosphatase 2 (SHP2), encoded by the PTPN11 proto-oncogene, is a key mediator of receptor tyrosine kinase (RTK)-driven cell signaling, promoting cell survival and proliferation. In addition, SHP2 is recruited by immune check point receptors to inhibit B and T cell activation. Aberrant SHP2 function has been implicated in the development, progression, and metastasis of many cancers. Indeed, small molecule SHP2 inhibitors have recently entered clinical trials for the treatment of solid tumors with Ras/Raf/ERK pathway activation, including tumors with some oncogenic Ras mutations. However, the current class of SHP2 inhibitors is not effective against the SHP2 oncogenic variants that occur frequently in leukemias, and the development of specific small molecules that target oncogenic SHP2 is the subject of current research. A common problem with most drug discovery campaigns involving cytosolic proteins like SHP2 is that the primary assays that drive chemical discovery are often in vitro assays that do not report the cellular target engagement of candidate compounds. To provide a platform for measuring cellular target engagement, we developed both wild-type and mutant SHP2 cellular thermal shift assays. These assays reliably detect target engagement of SHP2 inhibitors in cells. Here, we provide a comprehensive protocol of this assay, which provides a valuable tool for the assessment and characterization of SHP2 inhibitors.

摘要

由原癌基因PTPN11编码的含Src同源2(SH2)结构域的磷酸酶2(SHP2)是受体酪氨酸激酶(RTK)驱动的细胞信号传导的关键介质,可促进细胞存活和增殖。此外,免疫检查点受体可募集SHP2以抑制B细胞和T细胞的激活。SHP2功能异常与许多癌症的发生、发展和转移有关。事实上,小分子SHP2抑制剂最近已进入临床试验,用于治疗具有Ras/Raf/ERK途径激活的实体瘤,包括一些具有致癌性Ras突变的肿瘤。然而,目前这类SHP2抑制剂对白血病中频繁出现的SHP2致癌变体无效,开发靶向致癌性SHP2的特异性小分子是当前研究的主题。大多数涉及SHP2等胞质蛋白的药物发现活动的一个常见问题是,推动化学发现的主要检测方法通常是体外检测,无法报告候选化合物与细胞靶点的结合情况。为了提供一个测量细胞靶点结合的平台,我们开发了野生型和突变型SHP2细胞热位移检测方法。这些检测方法能够可靠地检测细胞中SHP2抑制剂与靶点的结合情况。在此,我们提供了该检测方法的全面方案,为评估和表征SHP2抑制剂提供了一个有价值的工具。

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本文引用的文献

1
Resistance to allosteric SHP2 inhibition in FGFR-driven cancers through rapid feedback activation of FGFR.通过FGFR的快速反馈激活对FGFR驱动的癌症中变构SHP2抑制产生抗性。
Oncotarget. 2020 Jan 21;11(3):265-281. doi: 10.18632/oncotarget.27435.
2
A cellular target engagement assay for the characterization of SHP2 (PTPN11) phosphatase inhibitors.用于鉴定 SHP2(PTPN11)磷酸酶抑制剂的细胞靶标结合分析。
J Biol Chem. 2020 Feb 28;295(9):2601-2613. doi: 10.1074/jbc.RA119.010838. Epub 2020 Jan 17.
3
Structural reorganization of SHP2 by oncogenic mutations and implications for oncoprotein resistance to allosteric inhibition.致癌突变导致 SHP2 的结构重排及其对癌蛋白变构抑制抗性的影响。
Nat Commun. 2018 Oct 30;9(1):4508. doi: 10.1038/s41467-018-06823-9.
4
Mechanism of activating mutations and allosteric drug inhibition of the phosphatase SHP2.磷酸酶 SHP2 激活突变和别构药物抑制的作用机制。
Nat Commun. 2018 Oct 30;9(1):4507. doi: 10.1038/s41467-018-06814-w.
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Off-target inhibition by active site-targeting SHP2 inhibitors.活性位点靶向的SHP2抑制剂的脱靶抑制作用。
FEBS Open Bio. 2018 Aug 1;8(9):1405-1411. doi: 10.1002/2211-5463.12493. eCollection 2018 Sep.
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RAS nucleotide cycling underlies the SHP2 phosphatase dependence of mutant BRAF-, NF1- and RAS-driven cancers.RAS 核苷酸循环是 SHP2 磷酸酶依赖性突变 BRAF、NF1 和 RAS 驱动癌症的基础。
Nat Cell Biol. 2018 Sep;20(9):1064-1073. doi: 10.1038/s41556-018-0169-1. Epub 2018 Aug 13.
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Selective inhibition of leukemia-associated SHP2 mutant by the allosteric SHP2 inhibitor SHP099.变构SHP2抑制剂SHP099对白血病相关SHP2突变体的选择性抑制作用
Leukemia. 2018 May;32(5):1246-1249. doi: 10.1038/s41375-018-0020-5. Epub 2018 Jan 30.
8
Kinase inhibitors: the road ahead.激酶抑制剂:前路漫漫。
Nat Rev Drug Discov. 2018 May;17(5):353-377. doi: 10.1038/nrd.2018.21. Epub 2018 Mar 16.
9
A High-Throughput Dose-Response Cellular Thermal Shift Assay for Rapid Screening of Drug Target Engagement in Living Cells, Exemplified Using SMYD3 and IDO1.高通量剂量反应细胞热转移分析用于快速筛选活细胞中的药物靶标结合,以 SMYD3 和 IDO1 为例。
SLAS Discov. 2018 Jan;23(1):34-46. doi: 10.1177/2472555217732014. Epub 2017 Sep 28.
10
Targeting Tyrosine Phosphatases: Time to End the Stigma.靶向酪氨酸磷酸酶:是时候消除偏见了。
Trends Pharmacol Sci. 2017 Jun;38(6):524-540. doi: 10.1016/j.tips.2017.03.004. Epub 2017 Apr 12.