Department of Chemical and Biomolecular Engineering, Vanderbilt University, Nashville, TN 37235, USA.
Department of Chemical and Biomolecular Engineering, Vanderbilt University, Nashville, TN 37235, USA; Department of Molecular Physiology and Biophysics, Vanderbilt University, Nashville, TN 37235, USA.
Cell Rep. 2020 Aug 4;32(5):107986. doi: 10.1016/j.celrep.2020.107986.
Isotope-based assessment of metabolic flux is achieved through a judicious balance of measurements and assumptions. Recent publications debate the validity of key assumptions used to model stable isotope labeling of liver metabolism in vivo. Here, we examine the controversy surrounding estimates of liver citric acid cycle and gluconeogenesis fluxes using a flexible modeling platform that enables rigorous testing of standard assumptions. Fasted C57BL/6J mice are infused with [C]lactate or [C]propionate isotopes, and hepatic fluxes are regressed using models with gradually increasing complexity and relaxed assumptions. We confirm that liver pyruvate cycling fluxes are incongruent between different C tracers in models with conventional assumptions. When models are expanded to include more labeling measurements and fewer constraining assumptions, however, liver pyruvate cycling is significant, and inconsistencies in hepatic flux estimates using [C]lactate and [C]propionate isotopes emanate, in part, from peripheral tracer recycling and incomplete isotope equilibration within the citric acid cycle.
通过明智地平衡测量和假设,可以实现基于同位素的代谢通量评估。最近的出版物就用于模拟体内稳定同位素标记肝脏代谢的关键假设的有效性展开了争论。在这里,我们使用灵活的建模平台来检查围绕使用 [C]乳酸或 [C]丙酸盐同位素估计肝柠檬酸循环和糖异生通量的争议,该平台能够严格测试标准假设。禁食的 C57BL/6J 小鼠被输注 [C]乳酸或 [C]丙酸盐同位素,使用具有逐渐增加的复杂性和放宽的假设的模型回归肝通量。我们确认,在具有传统假设的模型中,不同 C 示踪剂之间的肝丙酮酸循环通量不一致。然而,当模型扩展到包括更多的标记测量和更少的约束假设时,肝丙酮酸循环是显著的,并且使用 [C]乳酸和 [C]丙酸盐同位素估计肝通量的不一致性部分源于外周示踪剂再循环和柠檬酸循环内不完全同位素平衡。