• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

调控T细胞谱系定向的转录因子层级结构的功能定义。

Functional definition of a transcription factor hierarchy regulating T cell lineage commitment.

作者信息

Garcia-Perez Laura, Famili Farbod, Cordes Martijn, Brugman Martijn, van Eggermond Marja, Wu Haoyu, Chouaref Jihed, Granado David San León, Tiemessen Machteld M, Pike-Overzet Karin, Daxinger Lucia, Staal Frank J T

机构信息

Department of Immunohematology and Blood Transfusion, Leiden University Medical Center, Leiden, Netherlands.

Department of Human Genetics, Leiden University Medical Center, Leiden, Netherlands.

出版信息

Sci Adv. 2020 Jul 31;6(31):eaaw7313. doi: 10.1126/sciadv.aaw7313. eCollection 2020 Jul.

DOI:10.1126/sciadv.aaw7313
PMID:32789164
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7400773/
Abstract

T cell factor 1 (Tcf1) is the first T cell-specific protein induced by Notch signaling in the thymus, leading to the activation of two major target genes, and . Tcf1 deficiency results in partial arrests in T cell development, high apoptosis, and increased development of B and myeloid cells. Phenotypically, seemingly fully T cell-committed thymocytes with Tcf1 deficiency have promiscuous gene expression and an altered epigenetic profile and can dedifferentiate into more immature thymocytes and non-T cells. Restoring Bcl11b expression in Tcf1-deficient cells rescues T cell development but does not strongly suppress the development of non-T cells; in contrast, expressing Gata3 suppresses their development but does not rescue T cell development. Thus, T cell development is controlled by a minimal transcription factor network involving Notch signaling, Tcf1, and the subsequent division of labor between Bcl11b and Gata3, thereby ensuring a properly regulated T cell gene expression program.

摘要

T细胞因子1(Tcf1)是胸腺中Notch信号诱导产生的首个T细胞特异性蛋白,可导致两个主要靶基因的激活。Tcf1缺陷会导致T细胞发育部分停滞、高凋亡率以及B细胞和髓系细胞发育增加。从表型上看,看似完全定向于T细胞的Tcf1缺陷胸腺细胞具有混杂的基因表达和改变的表观遗传特征,并且可以去分化为更不成熟的胸腺细胞和非T细胞。在Tcf1缺陷细胞中恢复Bcl11b表达可挽救T细胞发育,但不能强烈抑制非T细胞的发育;相反,表达Gata3可抑制它们的发育,但不能挽救T细胞发育。因此,T细胞发育由一个最小的转录因子网络控制,该网络涉及Notch信号、Tcf1以及随后Bcl11b和Gata3之间的分工,从而确保T细胞基因表达程序得到适当调控。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bdf1/7400773/05e7c041ed24/aaw7313-F6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bdf1/7400773/a9d6099973d8/aaw7313-F1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bdf1/7400773/3b662649add6/aaw7313-F2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bdf1/7400773/998b514ad17f/aaw7313-F3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bdf1/7400773/b97fd1665e07/aaw7313-F4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bdf1/7400773/59b51d723867/aaw7313-F5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bdf1/7400773/05e7c041ed24/aaw7313-F6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bdf1/7400773/a9d6099973d8/aaw7313-F1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bdf1/7400773/3b662649add6/aaw7313-F2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bdf1/7400773/998b514ad17f/aaw7313-F3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bdf1/7400773/b97fd1665e07/aaw7313-F4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bdf1/7400773/59b51d723867/aaw7313-F5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bdf1/7400773/05e7c041ed24/aaw7313-F6.jpg

相似文献

1
Functional definition of a transcription factor hierarchy regulating T cell lineage commitment.调控T细胞谱系定向的转录因子层级结构的功能定义。
Sci Adv. 2020 Jul 31;6(31):eaaw7313. doi: 10.1126/sciadv.aaw7313. eCollection 2020 Jul.
2
Single-cell deletion analyses show control of pro-T cell developmental speed and pathways by Tcf7, Spi1, Gata3, Bcl11a, Erg, and Bcl11b.单细胞删除分析显示 Tcf7、Spi1、Gata3、Bcl11a、Erg 和 Bcl11b 对原 T 细胞发育速度和途径的控制。
Sci Immunol. 2022 May 20;7(71):eabm1920. doi: 10.1126/sciimmunol.abm1920.
3
Decreased TCF1 and BCL11B expression predicts poor prognosis for patients with chronic lymphocytic leukemia.TCF1 和 BCL11B 表达降低预示慢性淋巴细胞白血病患者预后不良。
Front Immunol. 2022 Sep 23;13:985280. doi: 10.3389/fimmu.2022.985280. eCollection 2022.
4
Realization of the T Lineage Program Involves GATA-3 Induction of Bcl11b and Repression of Cdkn2b Expression.T 细胞谱系的实现涉及 GATA-3 诱导 Bcl11b 和抑制 Cdkn2b 的表达。
J Immunol. 2022 Jul 1;209(1):77-92. doi: 10.4049/jimmunol.2100366. Epub 2022 Jun 15.
5
Priming of lineage-specifying genes by Bcl11b is required for lineage choice in post-selection thymocytes.在选择后的胸腺细胞中,谱系选择需要Bcl11b对谱系特异性基因进行启动。
Nat Commun. 2017 Sep 26;8(1):702. doi: 10.1038/s41467-017-00768-1.
6
GATA3 induces human T-cell commitment by restraining Notch activity and repressing NK-cell fate.GATA3通过抑制Notch活性和抑制自然杀伤细胞(NK细胞)命运来诱导人T细胞定向分化。
Nat Commun. 2016 Apr 6;7:11171. doi: 10.1038/ncomms11171.
7
Molecular dissection of prethymic progenitor entry into the T lymphocyte developmental pathway.胸腺前祖细胞进入T淋巴细胞发育途径的分子解析。
J Immunol. 2007 Jul 1;179(1):421-38. doi: 10.4049/jimmunol.179.1.421.
8
HEB in the spotlight: Transcriptional regulation of T-cell specification, commitment, and developmental plasticity.成为焦点的HEB:T细胞特化、定向分化及发育可塑性的转录调控
Clin Dev Immunol. 2012;2012:678705. doi: 10.1155/2012/678705. Epub 2012 Apr 22.
9
Bcl11b represses a mature T-cell gene expression program in immature CD4(+)CD8(+) thymocytes.Bcl11b 在未成熟的 CD4(+)CD8(+)胸腺细胞中抑制成熟 T 细胞基因表达程序。
Eur J Immunol. 2010 Aug;40(8):2143-54. doi: 10.1002/eji.200940258.
10
Architecture of a lymphomyeloid developmental switch controlled by PU.1, Notch and Gata3.PU.1、Notch 和 Gata3 控制的淋巴髓系发育转换的结构。
Development. 2013 Mar;140(6):1207-19. doi: 10.1242/dev.088559.

引用本文的文献

1
generated lymphoid progenitors encompass both T cell and innate lymphoid cell fates.产生的淋巴祖细胞包含T细胞和固有淋巴细胞命运。
Front Immunol. 2025 Jul 23;16:1617707. doi: 10.3389/fimmu.2025.1617707. eCollection 2025.
2
A mutant BCL11B-N440K protein interferes with BCL11A function during T lymphocyte and neuronal development.一种突变的 BCL11B-N440K 蛋白在 T 淋巴细胞和神经元发育过程中干扰 BCL11A 的功能。
Nat Immunol. 2024 Dec;25(12):2284-2296. doi: 10.1038/s41590-024-01997-5. Epub 2024 Nov 1.
3
Optimizing in vitro T cell differentiation by using induced pluripotent stem cells with GFP-RUNX1 and mCherry-TCF7 labelling.

本文引用的文献

1
Lineage-Determining Transcription Factor TCF-1 Initiates the Epigenetic Identity of T Cells.谱系决定转录因子 TCF-1 启动 T 细胞的表观遗传特性。
Immunity. 2018 Feb 20;48(2):243-257.e10. doi: 10.1016/j.immuni.2018.01.012.
2
Bcl11b and combinatorial resolution of cell fate in the T-cell gene regulatory network.Bcl11b 和 T 细胞基因调控网络中细胞命运的组合分辨率。
Proc Natl Acad Sci U S A. 2017 Jun 6;114(23):5800-5807. doi: 10.1073/pnas.1610617114.
3
Stem Cell Lineage Infidelity Drives Wound Repair and Cancer.干细胞谱系异常驱动伤口修复与癌症发生。
利用 GFP-RUNX1 和 mCherry-TCF7 标记的诱导多能干细胞优化体外 T 细胞分化。
Cell Prolif. 2024 Oct;57(10):e13661. doi: 10.1111/cpr.13661. Epub 2024 Jun 10.
4
Disorder-based T cell developmental order.基于紊乱的 T 细胞发育顺序。
Nat Immunol. 2023 Oct;24(10):1602-1603. doi: 10.1038/s41590-023-01623-w.
5
T cells in health and disease.健康与疾病中的 T 细胞。
Signal Transduct Target Ther. 2023 Jun 19;8(1):235. doi: 10.1038/s41392-023-01471-y.
6
Multi-modular structure of the gene regulatory network for specification and commitment of murine T cells.多模块结构的基因调控网络对鼠 T 细胞的鉴定和定型。
Front Immunol. 2023 Jan 31;14:1108368. doi: 10.3389/fimmu.2023.1108368. eCollection 2023.
7
Generation of CD34CD43 Hematopoietic Progenitors to Induce Thymocytes from Human Pluripotent Stem Cells.从人类多能干细胞生成 CD34CD43 造血祖细胞以诱导产生胸腺细胞。
Cells. 2022 Dec 14;11(24):4046. doi: 10.3390/cells11244046.
8
The 3D enhancer network of the developing T cell genome is shaped by SATB1.发育中的 T 细胞基因组的 3D 增强子网络由 SATB1 塑造。
Nat Commun. 2022 Nov 14;13(1):6954. doi: 10.1038/s41467-022-34345-y.
9
Waves of layered immunity over innate lymphoid cells.固有淋巴细胞的层状免疫波。
Front Immunol. 2022 Oct 4;13:957711. doi: 10.3389/fimmu.2022.957711. eCollection 2022.
10
Decreased TCF1 and BCL11B expression predicts poor prognosis for patients with chronic lymphocytic leukemia.TCF1 和 BCL11B 表达降低预示慢性淋巴细胞白血病患者预后不良。
Front Immunol. 2022 Sep 23;13:985280. doi: 10.3389/fimmu.2022.985280. eCollection 2022.
Cell. 2017 May 4;169(4):636-650.e14. doi: 10.1016/j.cell.2017.03.042. Epub 2017 Apr 20.
4
Asynchronous combinatorial action of four regulatory factors activates Bcl11b for T cell commitment.四种调控因子的异步组合作用激活Bcl11b以促进T细胞定向分化。
Nat Immunol. 2016 Aug;17(8):956-65. doi: 10.1038/ni.3514. Epub 2016 Jul 4.
5
MultiQC: summarize analysis results for multiple tools and samples in a single report.MultiQC:在一份报告中汇总多个工具和样本的分析结果。
Bioinformatics. 2016 Oct 1;32(19):3047-8. doi: 10.1093/bioinformatics/btw354. Epub 2016 Jun 16.
6
Tcf1 and Lef1 transcription factors establish CD8(+) T cell identity through intrinsic HDAC activity.Tcf1和Lef1转录因子通过内在的组蛋白去乙酰化酶(HDAC)活性来确立CD8(+) T细胞身份。
Nat Immunol. 2016 Jun;17(6):695-703. doi: 10.1038/ni.3456. Epub 2016 Apr 25.
7
ATAC-seq: A Method for Assaying Chromatin Accessibility Genome-Wide.ATAC测序:一种全基因组范围内检测染色质可及性的方法。
Curr Protoc Mol Biol. 2015 Jan 5;109:21.29.1-21.29.9. doi: 10.1002/0471142727.mb2129s109.
8
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.使用DESeq2对RNA测序数据的倍数变化和离散度进行适度估计。
Genome Biol. 2014;15(12):550. doi: 10.1186/s13059-014-0550-8.
9
deepTools: a flexible platform for exploring deep-sequencing data.deepTools:一个灵活的高通量测序数据处理平台。
Nucleic Acids Res. 2014 Jul;42(Web Server issue):W187-91. doi: 10.1093/nar/gku365. Epub 2014 May 5.
10
Transcriptional control of early T and B cell developmental choices.早期T细胞和B细胞发育选择的转录调控。
Annu Rev Immunol. 2014;32:283-321. doi: 10.1146/annurev-immunol-032712-100024. Epub 2014 Jan 22.