Caspar D L, Clarage J, Salunke D M, Clarage M
Rosenstiel Basic Medical Sciences Research Center, Waltham, Massachusetts.
Nature. 1988 Apr 14;332(6165):659-62. doi: 10.1038/332659a0.
Diffuse X-ray scattering from protein crystals provides information about molecular flexibility and packing irregularities. Here we analyse diffraction patterns from insulin crystals that show two types of scattering related to disorder: very diffuse, liquid-like diffraction, and haloes around the Bragg reflections. The haloes are due to coupled displacements of neighbouring molecules in the lattice, and the very diffuse scattering results from variations in atomic positions that are only locally correlated within each molecule. The measured intensity was digitally separated into three components: the Bragg reflections and associated haloes; the water and Compton scattering; and the scattering attributed to internal protein movements. We extend methods used to analyse disorder in membrane structures to simulate the diffuse scattering from crystalline insulin in terms of (1) the Patterson (autocorrelation) function of the ideal, ordered crystal structure, (2) the root-mean-square (r.m.s.) amplitude of the atomic movements, and (3) the mean distance over which these displacements are coupled. Movements of the atoms within the molecules, with r.m.s. amplitudes of 0.4-0.45 A, appear to be coupled over a range of approximately 6 A, as in a liquid. These locally coupled movements account for most of the disorder in the crystal. Also, the protein molecules, as a whole, jiggle in the lattice with r.m.s. amplitudes of approximately 0.25 A that appear to be significantly correlated only between nearest neighbours.
蛋白质晶体的漫散射X射线能提供有关分子柔韧性和堆积不规则性的信息。在此,我们分析了胰岛素晶体的衍射图样,其显示出两种与无序相关的散射:非常漫散的、类似液体的衍射,以及布拉格反射周围的光晕。这些光晕是由于晶格中相邻分子的耦合位移所致,而非常漫散的散射则源于原子位置的变化,这些变化仅在每个分子内局部相关。测量的强度被数字分离为三个分量:布拉格反射及其相关的光晕;水和康普顿散射;以及归因于蛋白质内部运动的散射。我们扩展了用于分析膜结构无序的方法,以根据以下方面模拟结晶胰岛素的漫散射:(1)理想有序晶体结构的帕特森(自相关)函数,(2)原子运动的均方根(r.m.s.)振幅,以及(3)这些位移耦合的平均距离。分子内原子的运动,其均方根振幅为0.4 - 0.45 Å,似乎在大约6 Å的范围内耦合,如同在液体中一样。这些局部耦合的运动占晶体中大部分无序的原因。此外,蛋白质分子作为一个整体,在晶格中以大约0.25 Å的均方根振幅晃动,似乎仅在最近邻之间显著相关。